TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTATTTAATATGACATAATTTAATGGAAGCAGTTTTACTTATGAT
AAATTCAGTCCCCTGAAATGTCTTCTGGGCAGCGGGAAGAGAGAGAGGTT
TAAAGAGGCTAGGTGGTGATTTGTTCTCGGAATCGGGCTATTATCCTATT
TTAATTAATGACAGACTGAGAGCGACATCAGTGTTAGAGGTGCGACCAGA
GTTCTTGGTCATTCCAGGTTTTTAATTAAGGTATTTGCCACCCAGATTGA
AATACAATAAAGAACAAAGTGTGGCTGGGTGCAAGTTTAAAGGGCATTCA
AGTGGGAAATTGCACGAAAGGTGATAAAAGAAACCACAGAGCGCAGCTTC
CCTCTGCCTTTCCAGCTTAACCCCCGAAGAGCTTGCTGGTGTTCAGTCCA
ACAGGTCTCACGGCTCTCCAGACAGCCATACCAGGATTCTTGGTATTGGT
ACTAGATTTTTTTTTCTTTGGAAACTGAGTTTTGTTGAAGAGTCAAATAG
AATACAAGGGGATAGCTGTGATTTTATTTTATTTTTTTTCACCCCCATTT
CCCCCCTGACCACTTACATCAAATGCTTGATTTTACCTTATCTTCACTAT
CCAATTACTCCCCTCCATTTTTTCAACTTTTCTGTGTTTACCTTAACCAC
CCGTACTTCCTCTTGTCTTTTTATTTCTGTATTTTGCCCC

NACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTAATAAATTAGAATGAAATGTT
TAATTTTGATTGGACATGTTAATTAGGTGAGCCAAAGAGGGCTCTGGATT
GTGGGACTTCAATACTTTGATGAGAGAGACCTTCAGAGTGAGTGGGGATA
GGAAAGGGGGGGGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNNN
NNNNNNNCNNNNNNTTTTTTTTTTTTNCCTTCTCTTTCTCCCCTTTTTTC
CTTCCTTTTTCCCCCCCCCCTCCCCCCCTTCTCCTTTCCCTCTCTTTTTT
TTTCTTTTTTTTTTTTCGCCCCCCCCCNNNNNNNNGNGNNNGGNNNGTTT
GGGGGCCCCCTCTCTCCTCGCCCCCTCCCTCCATTGCGCTCCCTTTTTTT
TTCTCCTTTCCTCCCCTCCTGTCCCCTCTTTTCTTCCTCTCTTTTCCTTT
CTTCTTCTCCCTATATTAATAATTTTGTCTGCTACCGTCCCCCTTTTTTT
CTCCCCCCCCCTTCTTCTTAACCACATCTTTACTTCACCGCTTTATCTAA
CTTCTGTCTTAACTCTCTTTCTCCCGCCCACTCCCTATCCTTCAATCTCT
CACAATCTCTCCACATCCCTCTTTTTTTGCCTTACCCCTTTTCTCTCTCT
ATTTTTACTTTTCTG

Query= MSMg01no182_e23.b1 MSMg01no182_e23.b1 CHROMAT_FILE:
MSMg01no182_e23.b1 PHD_FILE: MSMg01no182_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:01 2005
         (540 letters)



>mm_chr15_95413736_95414677
          Length = 942

 Score =  973 bits (503), Expect = 0.0
 Identities = 529/539 (98%), Gaps = 4/539 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctatttaatatgacataatttaatggaagcagttttacttatgataaattcagtc 64
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gaattctatttaatatgaaataatttaatggaagcagttttacttatgataaattcagtc 683

                                                                       
Query: 65  ccctgaaatgtcttctgggcagcgggaagagagagaggtttaaagaggctaggtggtgat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ccctgaaatgtcttctgggcagcgggaagagagagaggtttaaagaggctaggtggtgat 623

                                                                       
Query: 125 ttgttctcggaatcgggctattatcctattttaattaatgacagactgagagcgacatca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttgttctcggaatcgggctattatcctattttaattaatgacagactgagagcgacatca 563

                                                                       
Query: 185 gtgttagaggtgcgaccagagttcttggtcattccaggtttttaattaaggtatttgcca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gtgttagaggtgcgaccagagttcttggtcattccaggtttttaattaaggtatttgcca 503

                                                                       
Query: 245 cccagattgaaatacaataaagaacaaagtgtggctgggtgcaagtttaaagggcattca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cccagattgaaatacaataaagaacaaagtgtggctgggtgcaagtttaaagggcattca 443

                                                                       
Query: 305 agtgggaaattgcacgaaaggtgataaaagaaaccacagagcgcagcttccctctgcctt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 agtgggaaattgcacgaaaggtgataaaagaaaccacagagcgcagcttccctctgcctt 383

                                                                       
Query: 365 tccagcttaacccccgaagagcttgctggtgttcagtccaacaggtctcacggctctcca 424
           ||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tccagcttaactcgtgaagagcttgctggtgttcagtccaacaggtctcacggctctcca 323

                                                                       
Query: 425 gacagccataccaggattcttggtattggtac---tagatttttttttctttggaaactg 481
           ||||||||||||||||||||||||||||||||   |||| ||||||| ||||||||||||
Sbjct: 322 gacagccataccaggattcttggtattggtacaattaga-tttttttcctttggaaactg 264

                                                                      
Query: 482 agttttgttgaagagtcaaatagaatacaaggggatagctgtgattttattttattttt 540
           |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 263 agttttgttgaagagtcaaatagaatacaaggggatagttgtgattttattttattttt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 942
Length adjustment: 10
Effective length of query: 530
Effective length of database: 932
Effective search space:   493960
Effective search space used:   493960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)