Query= MSMg01no184_p08.b1 MSMg01no184_p08.b1 CHROMAT_FILE:
MSMg01no184_p08.b1 PHD_FILE: MSMg01no184_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:32 2005
(324 letters)
>mm_chr15_3484586_3485305
Length = 720
Score = 571 bits (295), Expect = e-167
Identities = 310/317 (97%), Gaps = 4/317 (1%)
Strand = Plus / Plus
Query: 5 gaattcgcccatttcactggaggataataacatcaatttttacagaaaataatattgctt 64
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattggcccatttcactggaagataataacatcaatttttacagaaaataatattgctt 264
Query: 65 acaattttacaattgttcaatcaatgtagcttaagaagcacaactaaaaaagaagcagta 124
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 265 acaattttacaattgttcaat----gtagcttaagaagcacaactaaaaaagaagcagta 320
Query: 125 ttgtgagttaagtaggagagaaatcaagataaaagagtggttgatataaaatatacagag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtgagttaagtaggagagaaatcaagataaaagagtggttgatataaaatatacagag 380
Query: 185 atgtaggtgggctaaatgctaagaagggctaaatgccccggaaatagatggagtgaggtg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtaggtgggctaaatgctaagaagggctaaatgccccggaaatagatggagtgaggtg 440
Query: 245 taatgccttcctctgggttctccttcatagtaggagaggaaggataaatagttaacagca 304
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaggccttcctctgggttctccttcatagtaggagaggaaggataaatagttaacagca 500
Query: 305 gatttttattatttatt 321
|||||||||||||||||
Sbjct: 501 gatttttattatttatt 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 720
Length adjustment: 9
Effective length of query: 315
Effective length of database: 711
Effective search space: 223965
Effective search space used: 223965
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_p08.g1 MSMg01no184_p08.g1 CHROMAT_FILE:
MSMg01no184_p08.g1 PHD_FILE: MSMg01no184_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:33 2005
(279 letters)
>mm_chr15_3612434_3613112
Length = 679
Score = 516 bits (267), Expect = e-151
Identities = 276/279 (98%)
Strand = Plus / Minus
Query: 1 aacccaacttcaatgagcagtagaaatccatcacagactcataatatgagatacatcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 aacccaacttcaatgagcagtagaaatccatcacagactcataatatgagatacatcatg 420
Query: 61 gaacacagagatcaatatttacatcaaagcaggaagggcaccattttttgaataacaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 419 gaacacagagatcaatatttacatcaaagcaggaagggcaccatttttttaataacaggt 360
Query: 121 acttttttgaataacagataatgcaaaattgagattatagttaaagagctgcacactgag 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 359 acttttttgaataacagataatgcaaaattgagattatagctaaagagctgcacactgag 300
Query: 181 actctttgtattttgctgaagtggatgcaaggtgtagcccattttcttctagtcttgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 actctttgtattttgctgaagtggatgcaaggtgtagcccattttcttctagtcttgaag 240
Query: 241 tctcaacttagaaaactgtttcctaatgtcacataagtg 279
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 239 tctcaacttagagaactgtttcctaatgtcacataagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
