Query= MSMg01no185_c02.b1 MSMg01no185_c02.b1 CHROMAT_FILE:
MSMg01no185_c02.b1 PHD_FILE: MSMg01no185_c02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:45 2005
(319 letters)
>mm_chr15_101738763_101739484
Length = 722
Score = 563 bits (291), Expect = e-165
Identities = 310/317 (97%), Gaps = 5/317 (1%)
Strand = Plus / Plus
Query: 5 gaattcagggccctgctgctggagcagctcccatgcggtctccagggccttgttctgttc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagggccctgctgctggagcagctcccatgcggtctccagggccttgttctgttc 264
Query: 65 ttccaggaagaccacctacggaacaacagggcagcaacattaggcaatgtttcagagcca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttccaggaagaccacctacggaacaacagggcagcaacattaggcaatgtttcagagcca 324
Query: 125 tggagggccttcattaggcagtgcaggtagttctgaacatctcgctcatggtctacctgc 184
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggagggccttcattaggcggtgcaggtagttctgaacatctcgctcatggtctacctgc 384
Query: 185 agaaaggcaggtgtgaagcggggctcttcctgtatctgcacaaaatgtggtcaggaagtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agaaaggcaggtgtgaagcggggctcttcctgtatctgcacaaaatgtggtcaggaagtt 444
Query: 245 caccagtcagagtacacaattttagaa-gtcacagaagaaga-g--tcttccccacacaa 300
|||||||||||||||||||||||| || |||| ||||||||| | ||||||||||||||
Sbjct: 445 caccagtcagagtacacaatttta-aacgtcatagaagaagaagaatcttccccacacaa 503
Query: 301 gacacagatctgtaagg 317
|||||||||||||||||
Sbjct: 504 gacacagatctgtaagg 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 722
Length adjustment: 9
Effective length of query: 310
Effective length of database: 713
Effective search space: 221030
Effective search space used: 221030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no185_c02.g1 MSMg01no185_c02.g1 CHROMAT_FILE:
MSMg01no185_c02.g1 PHD_FILE: MSMg01no185_c02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:46 2005
(395 letters)
>mm_chr15_101865201_101865995
Length = 795
Score = 710 bits (367), Expect = 0.0
Identities = 388/395 (98%)
Strand = Plus / Minus
Query: 1 tctccggtaggatgatgctcagtaagaacgggtgcattttgccctgcaacaggaaagagt 60
|||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||
Sbjct: 771 tctccggtaggatgatgctcagtaagaacgggtgcagcttgacctgcgacaggaaagagt 712
Query: 61 gctttggagcagacactagggacaacatggcctgcctcataggatctccaaggaaatttt 120
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 711 gctttggagcagacactagggacaacatggcctgcctcttaggatctccaaggagatttt 652
Query: 121 caaatatttcccctgagccctggagcctcacccttgagcaactgagttagaatctctgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 caaatatttcccctgagccctggagcctcacccttgagcaactgagttagaatctctgag 592
Query: 181 tttgaggactcaagcatcagcgtttgtgtaaggcttcctgcacgaacctggccagccagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tttgaggactcaagcatcagcgtttgtgtaaggcttcctgcacgaacctggccagccagc 532
Query: 241 catcaagtcaaagtacaccaaccaggtgttgtggtacacaataccaccccagcacacaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 catcaagtcaaagtacaccaaccaggtgttgtggtacacaataccaccccagcacacaat 472
Query: 301 ctcagcagtagggaagcagaaactggagggtcacaggcagggctacatagacaacacaca 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 471 ctcagcagtagggaagcagaaactggagggtcacaggtagggctacatagacaacacaca 412
Query: 361 cacacacacacacacacacacacacacacacacac 395
|||||||||||||||||||||||||||||||||||
Sbjct: 411 cacacacacacacacacacacacacacacacacac 377
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 29
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 795
Length adjustment: 9
Effective length of query: 386
Effective length of database: 786
Effective search space: 303396
Effective search space used: 303396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
