Query= MSMg01no186_b16.b1 MSMg01no186_b16.b1 CHROMAT_FILE:
MSMg01no186_b16.b1 PHD_FILE: MSMg01no186_b16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:00 2005
(313 letters)
>mm_chr15_87285414_87286128
Length = 715
Score = 524 bits (271), Expect = e-153
Identities = 298/307 (97%), Gaps = 2/307 (0%)
Strand = Plus / Minus
Query: 9 tcaggtggtagaaggagagatttgactctttcgagttgtactctgatctccatatatgtg 68
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 515 tcaggtggtagaaggagagatttgactcttttgagttgtactctgatctccatatatgtg 456
Query: 69 cagtgtcatgtgtataggccatacccaaaatgtaagtatgaaaaataatctcacattaag 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cagtgtcatgtgtataggccatacccaaaatgtaagtatgaaaaataatctcacattaag 396
Query: 129 actacataa-ttttttttgcaacatggtgtctttgctttggggcattatatagcgtacat 187
|||| |||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 395 actatataatttttttttgcaacatggtgtctttgctttggggcattgtatagtgtacat 336
Query: 188 gagcttcttctaaggatggctgtgtgtgaatataccaacgactctgcaagcatccattca 247
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 335 gagcttcttctaaggatggctgtgtgtgaatataccaatgactctgcaagcatccattaa 276
Query: 248 gtgtacttcatactgtctcctcattagttgggatgtgtgcttctttgcatt-atgctatg 306
||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 275 gtgtacttcatactgtctcctcattggttgggatgtgtgcttctttgcatttatgctatg 216
Query: 307 atcccca 313
|||||||
Sbjct: 215 atcccca 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 715
Length adjustment: 9
Effective length of query: 304
Effective length of database: 706
Effective search space: 214624
Effective search space used: 214624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no186_b16.g1 MSMg01no186_b16.g1 CHROMAT_FILE:
MSMg01no186_b16.g1 PHD_FILE: MSMg01no186_b16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:00 2005
(282 letters)
>mm_chr15_87131511_87132192
Length = 682
Score = 501 bits (259), Expect = e-146
Identities = 274/279 (98%)
Strand = Plus / Plus
Query: 1 tctcactcctcctgcaggtgaacatacctgggtagggaacatggacagtgcaaatcacct 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcactcctccggcaggtgaacatacctgggtagggaacatggacagtgcaaatcacct 260
Query: 61 gcaaagcaagcacaccatagataccatccctgcttcagatttcctccaccccctgaagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaaagcaagcacaccatagataccatccctgcttcagatttcctccaccccctgaagcc 320
Query: 121 tcttccctcctgtgagggaatcccaaacttagataagtggccttctctaacagacacaaa 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 tcttccctcctgtgagggaatcccaaacttagttaagtggccttctctaacagacacaaa 380
Query: 181 ctgtccaaaggtccagatatggagtcagggctctgtcatgtcagctctggcctaccaagt 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtccaaaggtccagatatggaatcagggctctgtcatgtcagctctggcctaccaagt 440
Query: 241 gtttgatctctttcggataacagcatagcacccaaatac 279
| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggtgatctctttcggataacagcatagcacccaaatac 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
