Query= MSMg01no188_j22.b1 MSMg01no188_j22.b1 CHROMAT_FILE:
MSMg01no188_j22.b1 PHD_FILE: MSMg01no188_j22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:19 2005
(206 letters)
>mm_chr15_34565789_34566394
Length = 606
Score = 389 bits (201), Expect = e-113
Identities = 201/201 (100%)
Strand = Plus / Minus
Query: 5 gaattctaaagctttatttgaaacatgttttccatccatctttgtttttttgagaatacc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gaattctaaagctttatttgaaacatgttttccatccatctttgtttttttgagaatacc 346
Query: 65 acaaactatttctagacaaattgctgacagtgaagtaatgggctattaaatttataatac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 acaaactatttctagacaaattgctgacagtgaagtaatgggctattaaatttataatac 286
Query: 125 agaattaatgttgtcagtggtggtatttttaccttttggggggatgggagacttttcagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 agaattaatgttgtcagtggtggtatttttaccttttggggggatgggagacttttcagg 226
Query: 185 tcattaatgcatgtcaaggaa 205
|||||||||||||||||||||
Sbjct: 225 tcattaatgcatgtcaaggaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 206
Length of database: 606
Length adjustment: 8
Effective length of query: 198
Effective length of database: 598
Effective search space: 118404
Effective search space used: 118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no188_j22.g1 MSMg01no188_j22.g1 CHROMAT_FILE:
MSMg01no188_j22.g1 PHD_FILE: MSMg01no188_j22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:19 2005
(293 letters)
>mm_chr15_34442458_34443149
Length = 692
Score = 532 bits (275), Expect = e-155
Identities = 287/291 (98%), Gaps = 1/291 (0%)
Strand = Plus / Plus
Query: 1 agtccctgccacttatggagtagctctatctggggcatgttagaggacactgcctgaagc 60
||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 201 agtccctgccacttatggagtagctctgtctggggcgtgttagaggacacagcctgaagc 260
Query: 61 atcttttacatgggaggtgtaaaccacagagccaacttcttaagcttgttatctatttat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 atcttttacatgggaggtgtaaaccacagagccaacttcttaagcttgttatctattt-t 319
Query: 121 tttcctgagttctctgttttcagtatctagtaaagtgtgtctttctttattctcccaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttcctgagttctctgttttcagtatctagtaaagtgtgtctttctttattctcccaaat 379
Query: 181 gactggagtttcggaatttacctgtgaggaagggatgtgcaccggcagctggtcttgtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gactggagtttcggaatttacctgtgaggaagggatgtgcaccggcagctggtcttgtgc 439
Query: 241 tcattggaagcctctgtctgaccatacagatgatccaggttcgaatcctgg 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcattggaagcctctgtctgaccatacagatgatccaggttcgaatcctgg 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 692
Length adjustment: 9
Effective length of query: 284
Effective length of database: 683
Effective search space: 193972
Effective search space used: 193972
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
