Query= MSMg01no189_l06.b1 MSMg01no189_l06.b1 CHROMAT_FILE:
MSMg01no189_l06.b1 PHD_FILE: MSMg01no189_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:45 2005
(442 letters)
>mm_chr15_27421247_27422088
Length = 842
Score = 793 bits (410), Expect = 0.0
Identities = 431/438 (98%)
Strand = Plus / Plus
Query: 5 gaattcctttgaagttctcttaactgaagcagttagacctcagcagagagagctatggaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctttgaagttctcttaactgaagcagttagacctcagcagagagagctatggaa 264
Query: 65 cagagcacgctgaaccctaggctgtgcccaggtagaacgggttttctcttcatgggttct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagagcacgctgaaccctaggctgtgcccaggtagaacgggttttctcttcatgggttct 324
Query: 125 acacgttcaggacattgtgctctgagtgttacagaatgaggaaggaaagagtaaccacca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acacgttcaggacattgtgctctgagtgttacagaatgaggaaggaaagagtaaccacca 384
Query: 185 tcttcgtgacatggtgttccttccaggaccacaagcaggtggaatagtttcccttctgag 244
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 tcttcgtgacatggtgttccttccaggaccacaagcaggtggaatagggtcccttctgag 444
Query: 245 cttatcattcagactagggctagagaagaaaagtggttctcttgctccagccagctgtat 304
||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 445 cttatcattcagattagggctagagaagaaaagtggtactcctgctccagccagctgtat 504
Query: 305 ctctcccaagcccagcccaccgagtttatctgagtgttttcttagaatctttaaactaaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctctcccaagcccagcccaccgagtttatctgagtgttttcttagaatctttaaactaaa 564
Query: 365 gcttttgatgttctacaggagtatataaccagctcgaggcacatctagattcctgcagaa 424
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcttttgatgttctgcaggagtagataaccagctcgaggcacatctagattcctgcagaa 624
Query: 425 gatggtttctgtcttaga 442
||||||||||||||||||
Sbjct: 625 gatggtttctgtcttaga 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no189_l06.g1 MSMg01no189_l06.g1 CHROMAT_FILE:
MSMg01no189_l06.g1 PHD_FILE: MSMg01no189_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:45 2005
(590 letters)
>mm_chr15_27454833_27455821
Length = 989
Score = 1056 bits (546), Expect = 0.0
Identities = 579/590 (98%), Gaps = 1/590 (0%)
Strand = Plus / Minus
Query: 1 ttctaactcagagaggctagacgcaggcagggcaggcagccagaaccagtagctgaatag 60
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 789 ttctaactcagagaggctagacccaggcagggcaggcagccagaaccagcagctgaatag 730
Query: 61 ggaatgggatgagagttctgctgttgctcaccattgcctccagttctccactctagggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 ggaatgggatgagagttctgctgttgctcaccattgcctccagttctccactctagggaa 670
Query: 121 atctggtcctaaatgggggcacttcgcaagaacagcctagtggcctgccagctgtgtgac 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 669 atctggtcctaaatgggggcacttcgcaagaacggcctagtggcctgccagctgtgtgac 610
Query: 181 ctttggcagcagcaagttaggacctgggaggtgcagcctatgtgcaaccaacaacaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 ctttggcagcagcaagttaggacctgggaggtgcagcctatgtgcaaccaacaacaatga 550
Query: 241 gtcctctccttgtatatctgccgtctttgcacttctgtgctgctgattgttgagcaatga 300
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 549 gtcctctccttgtatatctgccatctttgcacttctgtgctgctgagtgttgagcaatga 490
Query: 301 acggagcctccaccacccaccgggggaaaaatgtttttttttttttctctaaatggaaga 360
| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 489 agggaacctccaccacccaccgggggaaaaatg-ttttttttttttctctaaatggaaga 431
Query: 361 agtcatgctaaccaatgagccgttccagcttgcgcagcaaacacgcttgctaagcgaacg 420
|||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |
Sbjct: 430 agtcatgctaaccaatgagctgttccagcttgcacagcaaacacgcttgctaagcgaatg 371
Query: 421 cttatctgatggcagacttgtgtcggggtaaacagaattaatatctctgggatctgttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cttatctgatggcagacttgtgtcggggtaaacagaattaatatctctgggatctgttta 311
Query: 481 cactggcgagagcccactctgagggacgtggacagagtaactgcatcagggcgcagtgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 cactggcgagagcccactctgagggacgtggacagagtaactgcatcagggcgcagtgct 251
Query: 541 ctctcctgtcaagcaacagctaactggtgtgcaaactcagggaaagcagg 590
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ctctcctgtcaagcaacagctaactggtgtgcaaactcagggaaagcagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 989
Length adjustment: 10
Effective length of query: 580
Effective length of database: 979
Effective search space: 567820
Effective search space used: 567820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
