Query= MSMg01no191_p15.b1 MSMg01no191_p15.b1 CHROMAT_FILE:
MSMg01no191_p15.b1 PHD_FILE: MSMg01no191_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:46 2005
(316 letters)
>mm_chr15_67801277_67801992
Length = 716
Score = 553 bits (286), Expect = e-162
Identities = 307/316 (97%), Gaps = 4/316 (1%)
Strand = Plus / Plus
Query: 5 gaattcttgacctagtaaagaaagaaa----ttatatgctgaagttgtgaaatgtacatt 60
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 gaattcttgacctagtaaagaaagaaagaaattatatgctgaagttgtgaaatgtacatt 260
Query: 61 aagtctgaatcttctgtccatgcaattatgaggaaagaaaaagacatgtgtgctagcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 aagtctgaatcttctgtccatgcaattatgaggaaagaaaaagacatgtgtgcaagcttt 320
Query: 121 cccaccatgtctcaaaatatgaacattacagccacagtatgcgagcagtgctttaaagtg 180
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 cccatcatgtctcaaaatatgaacattacagccacagtatgggagcagtgctttaaagtg 380
Query: 181 ataggacaggcagttaagtttttttgaattatgtaaaggacaaaccagtatatgtagagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataggacaggcagttaagtttttttgaattatgtaaaggacaaaccagtatatgtagagt 440
Query: 241 ctatatcctatgctgtttcaaaaggctcacactgggagtctgggaataggtctcctgaga 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 441 ctatatcctatgctgtttcaaaaggctcacactaggagtctgggaataggtctcccgaga 500
Query: 301 gtaatacaaggatatc 316
||||||||||||||||
Sbjct: 501 gtaatacaaggatatc 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_p15.g1 MSMg01no191_p15.g1 CHROMAT_FILE:
MSMg01no191_p15.g1 PHD_FILE: MSMg01no191_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:46 2005
(281 letters)
>mm_chr15_67837470_67838150
Length = 681
Score = 520 bits (269), Expect = e-152
Identities = 278/281 (98%)
Strand = Plus / Minus
Query: 1 atgagtctcacctgtgcatttacctcactcaggaatttcaatcctatgatgcctagtccc 60
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 481 atgagtctcacctgtgaatttacctcactcaggaatttcagtcctatgatgcctagtccc 422
Query: 61 tcacatagacattgtgtgaccatttatgactgcaaggctaattttactatcctagtagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcacatagacattgtgtgaccatttatgactgcaaggctaattttactatcctagtagta 362
Query: 121 gctcaacactggtcttttggtgatggccttgctcttctatgctggctagctctttctaat 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 361 gctcaacactggtcttttggtgatggccttgttcttctatgctggctagctctttctaat 302
Query: 181 ggaatgacgttgtttctgccttcaatcctgctaatctcagggaatgaatctcaagttctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggaatgacgttgtttctgccttcaatcctgctaatctcagggaatgaatctcaagttctc 242
Query: 241 atctttaagaatttgtttggtttcaaattcaataccaaaaa 281
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atctttaagaatttgtttggtttcaaattcaataccaaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
