BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-192H03.T7 (MSMg01no192_h03.b1) | MSMg01-192H03.TJ (MSMg01no192_h03.g1) |
ACC | AG382119 | AG382120 |
length | 1,239 | 1,262 |
length of high quality (start - end) | 196 (499 - 694) | 228 (220 - 447) |
definition | CHROMAT_FILE: MSMg01no192_h03.b1 PHD_FILE: MSMg01no192_h03.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:09:49 2005 | CHROMAT_FILE: MSMg01no192_h03.g1 PHD_FILE: MSMg01no192_h03.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:09:49 2005 |
singlet/doublet | singlet | singlet |
---|
BLAST hit | unique | unique |
---|
Map location. | (60,853,104 - 60,853,299) | (79,274,448 - 79,274,674) |
---|
sequence | NNNGCGCACTGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCACTTATCTTTCCTTATATTTCAATAGATCCAGACAAGAACTAGACCTG
GCACAGAGAACTATATCTGTGTTAGCGTGAATAGAACCATTAAGTGGAAC
TCATCTATTATTTGCATCTGAGTGCCTCCTGAGAAGTGCTGTGTCTGAAA
GTGGAGCTGTTTGTACTAAGCTTTCTCATTCCCAGTGAACTTCAGTTTTA
CAGCAGTGTTAACTGTGAAGCACAATTTGGAATTTAATTTGATAAAGAAG
CAATGATCATCACAAATTCAGGCTCTCCCTTTTCTTCTCTCCCTCTTTTC
TGTTCTCTTTCTATCTTACTGGAGCACTACCGGAGCAGCTAACTCTAGCA
TTTGCCATGGAAGTATGACAAAAATATAAAAGGCTTCTCTTGTCTTCTCT
TTTTATATCCCCCACTATATGCATGGAAATCAAAGGAGAAAAAATTAGCC
ACTAATAACTATGAGTCCACTGCTTTGTTAGTTGGTTTGCTGAAGTTTTA
GCCTAAGGTAGCAATTTCAAATAATGGATTTTTAAATTATATTTTATGAG
AATATTGTGTTTTACTCCACACTATTCTTCGTTTTTCACATCTGATATAT
AATACTAAAGCTATTTCTCTGAAGCACTTGTTAAGAAGCACAAATGTGTG
CATGGCTTCTCTTGTCCTATTTTTCTAGGAAAGTTCACCTTTCTCTTTTT
TTGTCTCTCTGTTTCTGACTCTGTCTATTTCTGTCTCTCTGACTCTGTCT
TCTCTGAATCTGTTTTTCTTTATCTGACTGTCCGTCTGTCTGTTTGTCTG
TTTCTCTCTCTTCCCCTTGACATCTTTTGTTAAATTTTCCTTTCTTTTTT
TACTCTCTCTTCTTCCTTTTTTTTTCACTATCTTCTCTTTATTTTTTCCC
TTTATTTCTCCTTTTATCTCTTCTTTCCCTATTTCTCCTTTCTCATTCTT
TCTTTCTCTATTCTCTCTCCTTTCCTTAATCCCTCTCATTCATTCTTCCT
TTTCTCTTCATCTATTTTTATCTTCCTCTCTCTTTCCATCCTCTTTTCTC
TTTTTTACTCTTCTCTCTCTTTTCACTTCTTTCTCTTTCCTTACTTCCTT
TATTTTTCCTCATTTTTTACTTTTCTTTTTCCTTTCTACTTCTTTCCTAC
TTCCCATCTACTTCTCTTTCTCTTATTATCTATTCTTCA
| NNNTTTTCTGTGTAGCGGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTTGCAGGGATGTATTGAGGAAGAGTTCATG
CTTTCTTTTGAAGGGAACCTCTTATCCCTGTCTGAGAAATGACTTGGTGA
TGTCACCTGTGATGCAAAGCAAATAGGGAACTCTATGATGGGAGTGGGTG
GATAGGGCAGAATATTAGCAATTATCTCTAATCTTACTGTTATTGAAAAG
TGCTAATTAGTTAATGAGCATTGAAGTGCTTAACTATGTCTTACCCTTTT
AGAAGACTGAAAAAAATGGATGCCTGCTATTGTATTTTTCTATTAAGAAA
ACTAAAACAAAATAATTATTTTATAATGTTATAGCCTTTTGAGTCTAATT
GTAAAGACTGTTTTAGTGTAACTCTGATTATTACAATAAATATAGATTTT
TTTTTTTTCCCCCCCCCCAAAGAATCAGGGTCTTGCAAAAAAAAAGAGGA
GCTGTCNCNAAACACAAATCTAGTACATTTTATATTTCCTTATGCTTCTT
TCACACTTATGAAGAATGTGGATTCATTTGTTCCTTTCAAGTTTGGTGTT
TTATCAGTATTTATTACATCTACACACTTAAGTTTGCGGGCTCAAAGAGA
ATCTTTTTTTCAACAATATGGTTTTGCTTCTCTGCCAATAAAGAACAGAA
TTCATTCTTGTAAAGTAAGAACTCAATGTATGCTATTGGGCAATGTTTTT
GGGGCCTGGAAAGATGGGTTAAGAGCATTGACTGCTCTTCCAGAGTCCTG
ATTTCCATTCCCAACAACCACATGGTGGTTCACAACCTTCTATAACGAGA
TTCAACAACCTCTTCTGGAGCATCTGAAAACAGCTACCGTGGAATTTCTT
TATTTAACTTAGTAAATAAATTCTCCATAAACTATTAAAAACCAAAATTA
TTTTTTCTTTTAATGGGAAATATTTTTTTTTTTCTTTTTAACCGTAATTT
CCCTTTCTTAATTTTCCTCTTTTTAATACTTCTATTTAAACCTCCTTCCC
CCTGTTTTATAAAAGTGTTTTCTTTATCTCTCTTATAACACCGTCCCGTG
TTTAATTTTTTTAATTATCCTCCTCATACTACCCCTTCTTTTGTTTAATA
TGTGTCTCTTACGATTTCTCCAAATACATAATATACATCTTTATTGTGAT
TTTTTCTGTCTATTTTTTATTTTTTCTCTTCTCTTAGTATCTCATGCTTT
ATATTTCTCTTT
|
quality values | Open.Hide. 0 0 0 3 7 7 6 6 6 6 6 6 14 14 13 10 10 10 12 11 10 10 10 13 8 8 8 12 14 14 19 19 37 30 21 26 21 22 22 42 42 47 48 48 48 48 48 50 51 28
30 12 10 10 10 12 9 9 9 15 23 19 12 9 9 11 15 18 18 20 24 24 14 14 12 13 12 13 13 24 18 18 18 20 28 19 18 12 12 12 21 13 17 10 10 10 17 17 24 19
15 24 24 28 14 12 12 11 10 13 25 14 17 14 19 22 28 32 43 32 35 24 27 14 14 14 16 16 16 24 24 22 36 35 35 21 24 23 17 13 24 24 13 13 13 13 13 13 21 19
23 19 17 15 22 38 43 43 43 27 28 22 38 38 43 33 33 43 36 36 13 13 11 13 18 20 35 44 43 33 33 11 10 10 20 17 24 22 20 20 14 14 14 38 38 34 34 17 18 16
26 20 12 12 12 13 13 29 16 16 14 24 16 23 23 24 29 13 13 13 13 20 24 35 35 39 31 31 43 39 35 35 43 33 33 33 35 35 35 43 43 43 35 23 16 16 14 23 23 29
29 23 23 35 13 13 12 24 23 24 22 35 26 38 14 14 14 16 16 15 20 13 14 14 24 24 34 34 32 32 35 43 43 43 43 26 26 26 43 44 43 38 18 15 12 12 13 13 18 18
14 16 16 41 41 44 43 23 23 20 23 23 23 23 23 33 32 32 17 17 17 36 36 43 43 43 52 52 52 52 52 52 52 52 52 52 57 57 57 57 59 59 59 57 54 54 54 59 59 44
38 23 23 32 44 43 48 48 50 50 48 59 59 59 50 50 46 43 42 36 27 18 15 14 14 18 32 44 44 43 43 43 43 44 44 48 48 57 57 43 43 37 37 30 36 30 22 18 18 24
30 44 42 35 35 41 39 37 37 32 42 30 30 30 37 37 42 42 35 35 35 39 32 32 33 37 32 40 39 43 39 32 32 23 23 32 41 59 47 37 37 30 41 37 25 22 9 9 9 10
13 23 25 11 11 11 11 11 13 13 9 9 11 11 10 12 12 21 25 33 47 35 35 35 37 37 30 30 24 30 15 13 13 13 18 13 9 9 9 9 9 14 14 15 14 13 13 10 15 15
24 32 41 59 39 39 35 35 35 47 43 43 37 28 28 43 32 32 35 42 43 44 48 48 47 59 43 37 35 35 35 59 59 48 43 43 37 47 39 41 41 43 43 57 57 43 43 37 37 28
28 28 34 37 43 40 32 32 35 35 35 39 39 41 39 37 37 28 28 31 34 39 39 37 37 29 29 32 37 37 37 41 47 47 48 48 48 48 48 48 48 48 57 59 59 59 59 59 39 23
13 9 9 9 22 22 43 43 43 43 43 59 43 48 48 44 44 30 30 30 44 44 57 44 44 37 37 31 34 41 57 57 59 57 48 57 48 48 48 48 48 57 57 57 42 42 39 39 39 39
39 47 42 47 47 47 47 44 39 22 24 12 18 18 34 28 31 31 33 34 23 16 15 11 11 13 25 30 26 19 19 23 23 30 32 32 28 26 17 22 19 16 18 12 12 11 14 10 11 11
19 24 21 21 13 15 15 24 25 31 32 26 28 25 25 25 29 37 37 37 37 37 37 35 25 25 16 15 17 30 23 19 14 12 12 19 23 36 37 37 39 37 23 21 14 12 12 16 16 17
8 8 8 8 8 10 8 14 12 27 23 27 29 16 17 14 23 15 18 18 21 18 11 11 9 10 10 25 23 19 23 22 29 29 27 20 15 11 11 15 19 11 11 11 24 25 22 19 17 16
19 18 17 17 10 12 9 8 11 13 12 17 13 16 18 30 30 30 22 20 16 16 12 10 15 10 8 8 10 6 6 8 8 10 13 11 13 11 10 10 14 15 10 10 10 12 15 17 14 7
6 8 8 10 9 9 9 8 8 7 7 11 8 8 8 6 6 8 8 9 9 8 8 8 8 10 10 8 8 8 8 9 8 8 8 13 11 10 8 6 6 6 6 10 10 13 18 16 13 11
6 6 8 8 6 6 7 6 8 8 12 8 10 10 8 8 9 9 10 10 10 10 11 8 8 8 8 8 6 6 8 8 10 10 10 10 10 10 12 9 9 9 9 9 9 10 14 18 10 10
7 6 8 6 6 8 8 8 8 10 10 11 12 10 10 8 8 6 6 6 7 10 10 10 8 8 8 8 9 9 9 9 8 8 6 6 8 8 15 11 12 11 8 8 6 6 8 6 6 10
15 14 10 10 9 10 9 12 8 8 8 13 10 10 8 8 6 7 10 10 13 10 10 8 8 8 8 8 8 8 8 8 6 6 10 8 8 8 8 10 10 10 11 11 11 13 8 8 6 6
8 8 10 15 9 10 12 9 9 8 10 8 8 11 8 11 9 10 9 10 8 8 9 11 13 11 11 11 9 9 9 12 10 10 8 8 8 8 8 10 8 8 8 8 10 13 13 8 8 6
7 8 8 10 8 8 8 8 10 10 10 10 8 8 8 8 10 10 10 10 8 8 7 7 8 8 8 10 8 9 8 8 6 6 6 8 10 15 8 7 6 10 8 6 6 10 8 9 10 10
10 11 11 11 11 11 11 11 11 12 12 12 10 11 10 8 8 8 8 6 6 8 8 8 8 8 8 12 19 10 10 13 13 13 9 14 10 10 10 10 8 8 8 8 10 9 6 6 6 6
8 8 8 8 8 8 8 8 8 6 6 10 8 8 12 11 13 21 8 8 8 8 10 11 15 10 9 10 10 10 10 10 8 8 8 8 10 6 6 | Open.Hide. 0 0 0 3 6 6 6 6 6 6 6 6 6 6 8 8 7 7 8 8 8 8 13 8 7 9 8 15 12 21 23 22 22 19 21 21 33 30 33 21 29 21 31 29 34 37 36 36 40 43
43 43 43 39 43 43 48 57 59 59 59 46 47 43 57 48 48 32 44 32 32 26 21 13 15 15 18 15 13 9 14 12 14 12 15 11 12 12 13 15 14 11 13 18 18 22 32 32 33 28
28 28 33 33 37 44 42 38 40 24 24 15 27 12 14 12 15 18 24 32 24 24 24 19 24 24 16 15 15 32 21 28 18 24 12 11 11 18 24 43 23 27 24 27 27 14 14 14 15 27
24 17 17 17 38 24 35 24 21 11 11 11 12 12 12 12 18 15 14 14 14 9 9 9 9 10 11 11 11 11 11 11 28 28 34 30 16 14 12 12 11 12 12 22 24 39 39 43 21 13
10 10 10 10 10 10 10 9 9 9 9 11 13 15 28 33 11 21 11 11 15 38 43 57 57 52 52 52 57 57 52 52 52 57 57 57 42 42 39 43 43 57 57 57 57 57 59 57 57 39
39 39 57 57 57 57 43 44 28 39 39 38 38 52 43 43 42 43 52 57 57 57 57 59 50 35 35 42 42 42 44 42 32 32 42 43 43 52 57 57 52 52 52 57 57 59 59 57 57 57
37 36 36 28 28 33 43 43 50 59 59 59 68 59 59 42 42 35 42 37 43 42 46 43 43 39 43 43 57 42 42 31 42 42 59 59 59 57 57 57 57 57 59 34 32 17 17 17 41 34
54 54 54 57 59 59 59 59 59 59 59 47 47 43 43 43 48 48 57 59 59 59 57 47 47 43 39 39 47 47 47 47 46 47 46 48 59 59 47 47 47 41 26 15 9 9 9 9 10 11
11 9 12 12 28 28 34 35 35 39 59 59 47 34 34 28 28 28 37 37 43 43 43 43 48 48 57 48 48 48 47 59 59 59 59 59 59 59 59 59 47 59 28 22 12 9 10 10 15 14
16 32 32 19 19 18 10 10 12 16 20 26 32 30 20 9 8 8 8 8 13 28 36 34 30 23 15 9 9 9 9 9 9 12 9 9 9 11 14 16 26 24 14 7 6 6 6 6 6 7
7 10 17 18 27 3 0 3 0 3 29 27 44 47 47 41 41 48 48 48 39 39 36 37 39 59 59 59 59 43 43 39 39 39 48 43 48 48 59 57 59 48 48 48 59 57 59 59 59 47
47 37 39 35 37 37 47 47 48 48 40 37 25 25 28 28 28 28 32 25 33 33 57 57 47 57 57 57 57 48 44 44 46 46 47 42 42 47 47 54 47 59 39 40 32 28 28 32 40 47
43 43 43 37 37 33 39 43 43 43 43 48 48 48 39 39 43 43 36 43 30 30 17 14 14 21 21 32 41 32 47 37 28 23 23 24 21 21 22 12 12 18 21 24 28 15 15 13 13 12
22 17 15 15 15 28 34 39 32 28 20 20 28 31 35 41 37 35 35 28 28 31 31 34 34 30 16 16 16 16 22 26 32 34 34 20 20 20 20 15 28 19 22 17 17 21 18 26 13 22
22 15 11 11 10 12 12 16 23 18 23 31 30 28 28 21 25 13 12 12 20 19 15 12 9 9 10 9 10 12 13 26 31 36 32 28 20 12 11 20 16 18 18 15 19 19 23 26 25 32
28 14 10 8 8 8 10 9 15 15 17 11 11 12 25 18 12 11 11 11 17 11 12 11 16 16 19 20 22 19 15 15 12 9 9 9 10 8 8 9 9 8 8 8 8 10 9 20 23 23
11 11 9 13 8 8 8 8 14 15 14 15 8 8 8 9 10 10 17 13 12 12 12 9 9 10 9 9 10 12 18 28 25 24 14 16 12 9 9 8 9 9 9 9 9 11 12 8 8 8
8 8 8 9 9 10 10 8 8 8 8 10 10 10 10 10 12 13 11 10 9 9 9 9 12 14 12 9 10 8 8 8 8 15 10 9 9 8 8 8 8 8 8 12 10 8 8 10 8 8
12 11 10 10 9 7 6 6 6 8 8 8 8 8 9 13 18 17 14 12 12 10 10 10 8 8 10 13 10 8 8 10 8 9 11 11 11 11 11 13 8 8 8 8 8 8 10 12 10 10
12 19 22 19 11 6 6 6 8 8 9 9 11 10 10 8 9 13 15 13 11 11 11 15 15 27 23 16 18 13 14 10 10 10 8 8 8 8 8 8 11 8 9 8 8 8 8 9 9 9
9 9 9 9 8 8 6 6 6 8 8 8 10 8 8 8 8 8 6 6 10 8 8 8 8 6 6 8 8 8 8 10 8 8 8 11 10 9 11 11 11 10 9 8 10 10 10 10 15 16
7 10 6 6 8 12 19 28 15 14 15 9 9 9 8 8 8 8 8 13 6 6 6 6 8 8 8 10 10 10 10 10 10 8 8 6 8 10 10 8 8 9 9 9 11 6 6 6 6 8
8 8 8 9 9 13 14 9 9 9 10 18 17 9 9 8 9 10 8 9 8 8 8 8 9 8 8 8 8 8 10 12 8 8 8 9 9 9 10 10 10 10 10 6 8 6 6 8 8 8
8 8 8 8 8 6 6 8 8 9 9 9 9 9 9 8 13 8 8 6 6 8 8 8 7 7 7 7 10 13 8 8 8 13 13 8 6 6 6 6 12 10 8 8 8 8 6 6 6 6
10 10 13 16 9 8 8 10 8 10 10 8 8 10 15 17 8 6 6 6 10 10 10 9 9 6 6 6 6 8 12 8 8 9 9 7 8 8 10 10 10 10 13 8 6 6 6 8 10 15
13 13 10 10 9 8 8 8 8 8 8 8 |