TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTGTTTATCATACCGGAACCTCGCATTTTAATGTCTGAAAACCGTT
GGTCTAGAACACAAATCAGAGTGTGTGCAGAAATAAGGATGGGAAGTAGG
CCTTCTATTTGCTTATTTGGAAAACATACAAAATTGGAGGGAAATGAGGC
AGAAAAGATTTCCATAAGAGATAAAAATTTGTTATTTGCTCATATTGAAC
TTAAAATGACCATGCAGTCTGTATTTGTCAAAGTGAAGACATTTAGCAGT
CAATTAAAAATGAAATTCAGAGAGCAAGGAGAGTGGGGTTCCAGTTCCTG
GCATGGAAACCAGCCTAACATTACAGGTGGCATAAGCCATGATGGCAGTG
AGAAATACTGCTTGCCATGACCATTTAGAGTAAAGAGAAAAAGAGAAGGA
AGAGAATGAAACTTTCATGAGGACAGGCAGAAAATGAGAAACTACAGGAG
AATGAAGAAATAACAAAGATCAGTCTTCAACAGAAATTAGGCAAATTCTT
CTCCTTTAAAACAGAAAAATGCATAAATAGAGTTGACTCCGTCATAATCT
AAACTTCCTGTGGAAGAGCAAGGGTAGAGGTGACTAGTGAACTTTGACTC
TTATCTGTTGGGAATAGGGTAGACACCTTAGTAGCTCTGCAGATAGGATT
GGTAATCGTAATCAATGCGTGGCTATACTCTCTGAAGGTTTGTTTGGCCT
CCATAAAAATTAT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAACAATTCAAGAGCAAAAGCATC
CCTCAAATAATCCAAGCAAAAGTAGGCAGCATGGCTGGGTATGGCATCAC
TTCTTTAATCCTAGCACTCAGGAAGCAGAGGCAGGTGGATTGATGAGTTC
AAGGCCAGACTAGTCTACAGAGCATGTTTCAGGACAGCCAGGGCTACACA
GAGAAACCCTGTCTCAAAGCAAGCAAGCAAACAAACAAACACACAAACAA
GTGGGCAGTATATCTAAATAAGACATGTAAGGGAGACATACAAAAGACCA
AATGAGAATTTGGTTTATGAAAATTCACAACATCCTTAATCATTAAAGAA
ATGAAAATCAAAGCCACAATGAAATTCTGGCCCAATCTAGTTAAATTAGC
TACTGTCAGAGAGACAAAGCTAACTGCTCTTGTTCTCTCTGCTGAGACCT
GTGTCAAAGCACAAAGGAAGAAGTGTTGGCATGGGTCTAACAGGGGATAC
TTGTAGGAACAGACTGGGGAAGCCACTGTGAACCTCGGTGTAAGTTTCCC
TCAAAACTTAAAAGTAGAATCACCATAGGAGCCAGCAACCTCACTACAAA
GGAGATCAGCTCGACACGCCAACAATACAACCCCATTCCCAACTCATAAG
AACTAAGAAATAGAAAGAACCTGAATGCCCACCATCTAATGAATCCTAAT
GAATGGATACAGAA

Query= MSMg01no194_o03.b1 MSMg01no194_o03.b1 CHROMAT_FILE:
MSMg01no194_o03.b1 PHD_FILE: MSMg01no194_o03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:54 2005
         (593 letters)



>mm_chr15_3934111_3935103
          Length = 993

 Score = 1058 bits (547), Expect = 0.0
 Identities = 577/587 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgtttatcataccggaacctcgcattttaatgtctgaaaaccgttggtctagaa 64
           ||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtttatcaaaaaggaacctcgcattttaatgtctgaaaaccgttggtctagaa 264

                                                                       
Query: 65  cacaaatcagagtgtgtgcagaaataaggatgggaagtaggccttctatttgcttatttg 124
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 265 cacaaatcagagtgtgtgcagaaataaggatggaaagtaggccttctatttgcttatttg 324

                                                                       
Query: 125 gaaaacatacaaaattggagggaaatgaggcagaaaagatttccataagagataaaaatt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaaaacatacaaaattggagggaaatgaggcagaaaagatttccataagagataaaaatt 384

                                                                       
Query: 185 tgttatttgctcatattgaacttaaaatgaccatgcagtctgtatttgtcaaagtgaaga 244
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 385 tgttatttgctcatattgaacttaaaatgaccatgcagtcagtatttgtcaaagtgaaga 444

                                                                       
Query: 245 catttagcagtcaattaaaaatgaaattcagagagcaaggagagtggggttccagttcct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catttagcagtcaattaaaaatgaaattcagagagcaaggagagtggggttccagttcct 504

                                                                       
Query: 305 ggcatggaaaccagcctaacattacaggtggcataagccatgatggcagtgagaaatact 364
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 505 ggcatggaaaccagcctaacattataggtggcataagccatgatggcagtgagaaatact 564

                                                                       
Query: 365 gcttgccatgaccatttagagtaaagagaaaaagagaaggaagagaatgaaactttcatg 424
           |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcttgccatgagtatttagagtaaagagaaaaagagaaggaagagaatgaaactttcatg 624

                                                                       
Query: 425 aggacaggcagaaaatgagaaactacaggagaatgaagaaataacaaagatcagtcttca 484
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 625 aggacaggcagaaaatgagaaactacaggagaaagaagaaataacaaagatcagtcttca 684

                                                                       
Query: 485 acagaaattaggcaaattcttctcctttaaaacagaaaaatgcataaatagagttgactc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acagaaattaggcaaattcttctcctttaaaacagaaaaatgcataaatagagttgactc 744

                                                          
Query: 545 cgtcataatctaaacttcctgtggaagagcaagggtagaggtgacta 591
           | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cctcataatctaaacttcctgtggaagagcaagggtagaggtgacta 791


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space:   573089
Effective search space used:   573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)