Query= MSMg01no199_p10.b1 MSMg01no199_p10.b1 CHROMAT_FILE:
MSMg01no199_p10.b1 PHD_FILE: MSMg01no199_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:20:43 2005
(495 letters)
>mm_chr15_11894987_11895882
Length = 896
Score = 928 bits (480), Expect = 0.0
Identities = 489/492 (99%), Gaps = 1/492 (0%)
Strand = Plus / Minus
Query: 5 gaattcaggacctctccttattctggccatgctcactctagcccaaagatttatttattt 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gaattcaggacctctgcttattctggccatgctcactctagcccaaagatttatttattt 693
Query: 65 attatatataagtacactgtagcttcaggcacacctgaagagggcgtcagatctcattat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 attatatataagtacactgtagcttcaggcacacctgaagagggcgtcagatctcattat 633
Query: 125 ggatggttgtgagccaccatgtggttgctgtgatctgagctcaggacctttggaagagca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ggatggttgtgagccaccatgtggttgctgtgatctgagctcaggacctttggaagagca 573
Query: 185 gtcagtgctcttatccagagccagctcaccagcccgacttcaaaa-tttttttttattgt 243
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 572 gtcagtgctcttatccagagccagctcaccagcccgacttcaaaattttttttttattgt 513
Query: 244 atttgtttaatgtgcacacacacatgtgcacatgaatgagggggaaagagagagatagag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 atttgtttaatgtgcacacacacatgtgcacatgaatgagggggaaagagagagatagag 453
Query: 304 atacagagatacagagagtacacaagcatgcctgcccatgtcgcagcgagcatgtggagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 atacagagatacagagagtacacaagcatgcctgcccatgtcgcagcgagcatgtggagg 393
Query: 364 tcagaggacaacttatgatggttctcttcttccacaatgcaggtcttggcaagtgctgag 423
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 392 tcagaggacaacttatgatggttcccttcttccacaatgcaggtcttggcaagtgctgag 333
Query: 424 ccatgtctctggtcccataaacaaaatgatcttatttaattactttgtgttttgagagtt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ccatgtctctggtcccataaacaaaatgatcttatttaattactttgtgttttgagagtt 273
Query: 484 tatttggagggt 495
||||||||||||
Sbjct: 272 tatttggagggt 261
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 896
Length adjustment: 10
Effective length of query: 485
Effective length of database: 886
Effective search space: 429710
Effective search space used: 429710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no199_p10.g1 MSMg01no199_p10.g1 CHROMAT_FILE:
MSMg01no199_p10.g1 PHD_FILE: MSMg01no199_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:20:43 2005
(336 letters)
>mm_chr15_11854444_11855179
Length = 736
Score = 642 bits (332), Expect = 0.0
Identities = 335/336 (99%)
Strand = Plus / Plus
Query: 1 catatagtaatcaaatacttgatcaccctaaataaaatcgtagagttgttacaaagaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catatagtaatcaaatacttgatcaccctaaataaaatcgtagagttgttacaaagaaag 260
Query: 61 gaaaaattgaaggaatgaataatgagggaccaacaccaaatggtagcctttgagtacagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaaattgaaggaatgaataatgagggaccaacaccaaatggtagcctttgagtacagt 320
Query: 121 ggtccctctatagccatggttacacattctagtacttagcaaaatccatgaaaagtaatt 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtccctctgtagccatggttacacattctagtacttagcaaaatccatgaaaagtaatt 380
Query: 181 tagtgttgtcatctaagccacacatccatgtgctttaaataatctcctgattacctgtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagtgttgtcatctaagccacacatccatgtgctttaaataatctcctgattacctgtaa 440
Query: 241 tgtataaaaatttaaatgcagctgggcgtggtggggcacgcctttaatcccagcactcgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtataaaaatttaaatgcagctgggcgtggtggggcacgcctttaatcccagcactcgg 500
Query: 301 gaggcagaggcaggcggatttctgagttcgaggcca 336
||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaggcagaggcaggcggatttctgagttcgaggcca 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
