Query= MSMg01no201_g03.b1 MSMg01no201_g03.b1 CHROMAT_FILE:
MSMg01no201_g03.b1 PHD_FILE: MSMg01no201_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:21:29 2005
(424 letters)
>mm_chr15_63911770_63912588
Length = 819
Score = 472 bits (244), Expect = e-137
Identities = 353/410 (86%), Gaps = 37/410 (9%)
Strand = Plus / Plus
Query: 15 ggaattctatatggttctgggctaccatgtgtgtgctgggaattctaagagcaacaagtg 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaattctatatggttctgggctaccatgtgtgtgctgggaattctaagagcaacaagtg 300
Query: 75 ctcttgaccacggagccattggccacccccagacagttaagaaagatatttgttgcccgg 134
||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||
Sbjct: 301 ctcttgaccacggagccattggctagtcccagacagttaagaaagatatttgttgcctgg 360
Query: 135 cagtggtggcgcacacctttaatcccagcacttgggaggcagaggcaggtggatctcttg 194
||||| ||||||| |||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 361 cagtgatggcgcatgcctttaatcccagcacttgggaggcagaggcaagcggatctcttg 420
Query: 195 agttccaagccagcctggtctacagagtgagttccaggacagccagggctatacagagaa 254
||||| || || |||||||||||| ||||||||
Sbjct: 421 agttc---------------ta--------------ggccagccagggctacacagagaa 451
Query: 255 atcctgtctcgaaaaaccaaaaaaaaaaaaa-aaaa-aa-atatttgttaaggtatacct 311
| |||||||| |||||| ||| |||| |||| |||| || |||||||||||| |||||||
Sbjct: 452 accctgtctcaaaaaacgaaacaaaacaaaacaaaacaagatatttgttaagctatacct 511
Query: 312 tatagcctgttggagctggcgcacaaggcaacttttggcaaaagacataatttttgtgtt 371
||||||||||||||||| | ||||||||||||| |||||||||| |||||||||||
Sbjct: 512 tatagcctgttggagct-----ataaggcaacttttgacaaaagacattatttttgtgtt 566
Query: 372 ttattagctatttaacaatatacgccaattgtacaaacaatagtagtttc 421
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ttattagctatttaacaatatacgccaattgtacaaacaatagtagtttc 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 819
Length adjustment: 9
Effective length of query: 415
Effective length of database: 810
Effective search space: 336150
Effective search space used: 336150
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no201_g03.g1 MSMg01no201_g03.g1 CHROMAT_FILE:
MSMg01no201_g03.g1 PHD_FILE: MSMg01no201_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:21:30 2005
(598 letters)
>mm_chr15_64024157_64025155
Length = 999
Score = 1042 bits (539), Expect = 0.0
Identities = 584/599 (97%), Gaps = 1/599 (0%)
Strand = Plus / Minus
Query: 1 cctaatatcctaagtccagctccccggaacatcgccagtgttgtctgttgagtgacccac 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 799 cctaatatcctaagtccagctccccggaaaatcgccagtgttgtctgttgagtgagggat 740
Query: 61 acagaggtgacagaggcaatccttgcctcctaagggaaaatatgcatgtgcacagatgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 acagaggtgacagaggcaatccttgcctcctaagggaaaatatgcatgtgcacagatgat 680
Query: 121 gtgggaaaccgtgcataagtacaggacttacaggcaaggacggttccttctgactgagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gtgggaaaccgtgcataagtacaggacttacaggcaaggacggttccttctgactgagga 620
Query: 181 aagccttaagattctgacacagacttgtttactcattcatgtagtaaatactaggcatgt 240
||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 619 aagccttaagactctgacacagacttgtttactcgttcatgtagtaaatactaggcatgt 560
Query: 241 gctgtgggcttccacacaaaggcagaacaaaaagctggcacatgaataccacctccaacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gctgtgggcttccacacaaaggcagaacaaaaagctggcacatgaataccacctccaacg 500
Query: 301 cagtcaccaggcaagccagctgccatgcatcagtcctcggtatacgtctctccatgtctg 360
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 499 cagtcaccaggcaagccagctgccatgcatcagtccccggtagacttctctccatgtctg 440
Query: 361 tgaagatcatggtgagcctggcagtccttcatg-agggcatgtgtggtgggagttaacat 419
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 439 tgaagatcatggtgagcctggcagtccttcatgaagggcatgtgtggtgggagttaacat 380
Query: 420 ctgttgtataacctaatagagccatacagggtgctgttttagtaacaaagcaagagcaac 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ctgttgtataacctaatagagccatacagggtgctgttttagtaacaaagcaagagcaat 320
Query: 480 gatcacgagaccagaacaaagaggtgatgttgggtaggcgttgattagcatgaggtgatg 539
| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 319 gctcaagagaccagaacaaagaggtgatgttgggtaggcggtgattagcatgaggtgatg 260
Query: 540 agaaattctcagattggggtatatatctttctcggtggtaagtggccttctgtggccac 598
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 agaaattctcagattggggtatatatctttctcggtggtaagtggccttctgtggccac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 999
Length adjustment: 10
Effective length of query: 588
Effective length of database: 989
Effective search space: 581532
Effective search space used: 581532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
