Query= MSMg01no201_n16.b1 MSMg01no201_n16.b1 CHROMAT_FILE:
MSMg01no201_n16.b1 PHD_FILE: MSMg01no201_n16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:23 2005
(306 letters)
>mm_chr15_102353141_102353846
Length = 706
Score = 505 bits (261), Expect = e-147
Identities = 294/305 (96%)
Strand = Plus / Plus
Query: 2 gcggaattctgtgggagaaaagatcctgtcccttcgcagttgctccgtgggctctctagg 61
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 202 gcggaattctgtgggagaaaagatcctatcccttcgcagttgctccgtgggctctctagg 261
Query: 62 ggttctgggctccgcctgctgcagtgtcctcagtgaactctctgaggagcaggctttcca 121
|| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 262 ggctctgggctctgcctgctgcagtgtcctcagtgagctctctgaggagcaggctttcca 321
Query: 122 tatcagttatctggatattggtatggccaactagagactggggatggaggggactggatc 181
| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tgtcagctatctggatattggtatggccaactagagactggggatggaggggactggatc 381
Query: 182 aaagcaagtaaaaaggagttgggagatgggtgatgcgtacactgtttggtgccccctccc 241
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 382 aaagcaagtatgaaggagttgggagatgggtgatgtgtacactgtttggtgccccttccc 441
Query: 242 caccagtgcctccctcctctttcttggtttccagaggaactgagcctgagtgggctctgc 301
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 caccagtgcctcccttctctttcttggtttccagaggaactgagcctgagtgggctctgc 501
Query: 302 cagtg 306
|||||
Sbjct: 502 cagtg 506
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 306
Length of database: 706
Length adjustment: 9
Effective length of query: 297
Effective length of database: 697
Effective search space: 207009
Effective search space used: 207009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no201_n16.g1 MSMg01no201_n16.g1 CHROMAT_FILE:
MSMg01no201_n16.g1 PHD_FILE: MSMg01no201_n16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:23 2005
(274 letters)
>mm_chr7_134366218_134366891
Length = 674
Score = 514 bits (266), Expect = e-150
Identities = 273/276 (98%), Gaps = 2/276 (0%)
Strand = Plus / Minus
Query: 1 cctcaaaggt--ggactgaggtggagacatacaagccaaattaaccctttattcctcaag 58
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 cctcaaaggtggggactgaggtggagacatacaagccaaattaaccctttattcctcaag 525
Query: 59 tggctttcgatcatggtttttatcacagcaatgggaaacaaactaagacacagcgcagga 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tggctttcgatcatggtttttatcacagcaatgggaaacaaactaagacacagcgcagga 465
Query: 119 cctgtgggttgaagatggcaaaggctttcaatcccatttgacagataaggagcaaaaaaa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 cctgtgggttgaagatggcaaaggctttcaatcccatttgacagataaggagcaaaaaaa 405
Query: 179 ctcagagggggcttttttttcctcttcctgtgtgtgtgtgtgatgacacatgtacataaa 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ctcagagggggcttttttttcctcttcctgtgtgtgtgtgtgatgacacatgtacataaa 345
Query: 239 tgtgtagatttgcatgcccacgtgtgcatgcagagg 274
|||| |||||||||||||||||||||||||||||||
Sbjct: 344 tgtgcagatttgcatgcccacgtgtgcatgcagagg 309
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
