Query= MSMg01no206_i14.b1 MSMg01no206_i14.b1 CHROMAT_FILE:
MSMg01no206_i14.b1 PHD_FILE: MSMg01no206_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:44 2005
(570 letters)
>mm_chr15_5640173_5641142
Length = 970
Score = 980 bits (507), Expect = 0.0
Identities = 543/555 (97%), Gaps = 2/555 (0%)
Strand = Plus / Plus
Query: 17 gaattctttgtttacctctgagccccattttt-aatggggttatttgattttctgagtta 75
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 217 gaattctttgtttagctctgagccccattttttaatggggttatttgattttctgagtta 276
Query: 76 acatgtagaagaatcgggaattgatccattcctatctccttctactaaggtcaaatctta 135
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 277 acatgtagaagaat-gggaattgatccattcctatctccttctactaaggtcaaatctaa 335
Query: 136 gtggatcaacgaactccacataaaaccagagacactgaaacatatagaggataaagtggg 195
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 336 gtggatcaaggaactccacataaaaccagagacactgaaacttatagaggataaagtggg 395
Query: 196 gaaaagccttgaagatatgagcacaggggaaaaattcctgaatagaacagcaatgatttg 255
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 396 gaaaagcctcgaagatatgagcacaggggaaaaattcctgaatagaacagcaatgacttg 455
Query: 256 tgctgtaagatggagaatcgacaaatggaacctcataaaattgcaaagcttctgtaagcc 315
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tgctgtaagatggagaatcaacaaatggaacctcataaaattgcaaagcttctgtaagcc 515
Query: 316 aaaagacaccgtcaataagacactaacagattgggaaaggatctttaccaatcctaaatc 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 aaaagacaccgtcaataagacactaacagattgggaaaggatctttaccaatcctaaatc 575
Query: 376 agataggccactaatatccaatatatataaaggaaccaattctttacccacaccatggga 435
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 agataggggactaatatccaatatatataaaggaaccaattctttacccacaccatggga 635
Query: 436 gttgagttttcagaagtaagcaagctgcttgaccgtctggtttatcctggcccctgctat 495
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 636 gttgagttttcagaagtaagcaagctgattgaccgtctggtttatcctggcccctgctat 695
Query: 496 cttactggagtttatatttcatcccagtcagctgagtccttccttgaccttaggccactg 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 cttactggagtttatatttcatcccagtcagctgagtccttccttgaccttaggccactg 755
Query: 556 tgataatcctgggag 570
|||||||||||||||
Sbjct: 756 tgataatcctgggag 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no206_i14.g1 MSMg01no206_i14.g1 CHROMAT_FILE:
MSMg01no206_i14.g1 PHD_FILE: MSMg01no206_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:45 2005
(546 letters)
>mm_chr15_5767353_5768298
Length = 946
Score = 1033 bits (534), Expect = 0.0
Identities = 540/542 (99%)
Strand = Plus / Minus
Query: 5 tgccctagcagcaaacagctgtccttcccaggcagcttccacagggcatctgaagagcat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tgccctagcagcaaacagctgtccttcccaggcagcttccacagggcatctgaagagcat 687
Query: 65 tacaaacagctggggctgccacggggttttctgattcctgggtttgcttatagtccttca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tacaaacagctggggctgccacggggttttctgattcctgggtttgcttatagtccttca 627
Query: 125 tgcgaggaagccggggtaactgggaaggatgtagccactcttaaagatccgtgttgttca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tgcgaggaagccggggtaactgggaaggatgtagccactcttaaagatccgtgttgttca 567
Query: 185 attctaatcatcttgaaatacttacaggaaaaataaacattaaactgaacacttggtatc 244
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 566 attctaatcatcttgaaatacttacaggaaaaataaacattaaactgagcacttggtatc 507
Query: 245 aacaaattttaacaacgttcaatttcctgtcttgatgtcccttgcaaatgcagtactgtg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aacaaattttaacaacgttcaatttcctgtcttgatgtcccttgcaaatgcagtactgtg 447
Query: 305 tcatttctcaaatttgtattattccatgcttttcaccatatactggttttaagtaactgc 364
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 446 tcatttctcaaatttgtattattccatgcttttcagcatatactggttttaagtaactgc 387
Query: 365 aattaattgccaaaacaaaatacattgttctactactgactccatttctttaaagaattt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aattaattgccaaaacaaaatacattgttctactactgactccatttctttaaagaattt 327
Query: 425 taactaatgtgaaagttaataacaacaacagaagtaagttgcagctgccataaactgcaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 taactaatgtgaaagttaataacaacaacagaagtaagttgcagctgccataaactgcaa 267
Query: 485 acatgtttgagaacttttggaaatgtctaaacaatagagtttggaaggatttttaaatgt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 acatgtttgagaacttttggaaatgtctaaacaatagagtttggaaggatttttaaatgt 207
Query: 545 at 546
||
Sbjct: 206 at 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space: 501696
Effective search space used: 501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
