Query= MSMg01no210_h10.b1 MSMg01no210_h10.b1 CHROMAT_FILE:
MSMg01no210_h10.b1 PHD_FILE: MSMg01no210_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:01 2005
(267 letters)
>mm_chr15_27799813_27800479
Length = 667
Score = 441 bits (228), Expect = e-128
Identities = 252/260 (96%)
Strand = Plus / Minus
Query: 5 gaattccctatgcaatgcaggctggttgtaagtgggcagttgatcccgccgctgcctttt 64
|||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 464 gaattccctatgtaatgcaggctggttgtaagcaggcagttgatcccgccgccgcctttt 405
Query: 65 gagtatttggattatatgatggcattactatgcccggtttattttgtttcaagtgggggt 124
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 404 gagtatttggattatatgatggcattactatgcccggtttattttttttcaagtggggct 345
Query: 125 ttttaataacattaaaaatcaagtttaattttaggtgactgagaaaaaaaatgctacaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 344 ttttaataacattaaaaatcaagtttaattttaggtgactgagaaaaaaaatgctccaca 285
Query: 185 aagaaccttcacaaattgctgtgacatgctgtgacacgcctctctatgcatgggagttta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 aagaaccttcacaaattgctgtgacatgctgtgacacgcctctctatgcatgggagttta 225
Query: 245 tgaagagctgctttaatcta 264
||||||| ||||||||||||
Sbjct: 224 tgaagagttgctttaatcta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 667
Length adjustment: 9
Effective length of query: 258
Effective length of database: 658
Effective search space: 169764
Effective search space used: 169764
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no210_h10.g1 MSMg01no210_h10.g1 CHROMAT_FILE:
MSMg01no210_h10.g1 PHD_FILE: MSMg01no210_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:01 2005
(279 letters)
>mm_chr15_27722085_27722754
Length = 670
Score = 489 bits (253), Expect = e-143
Identities = 269/279 (96%), Gaps = 9/279 (3%)
Strand = Plus / Plus
Query: 1 tgttgggaaatggggtgtcctggctgagtgaaagatgtcagaaacccgagtaatagataa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttgggaaatggggtgtcctggctgagtgaaagatgtcagaaacccgagtaataga--- 257
Query: 61 ctaactaaatgaaggtgataagcgacagcttttccttacagagaaacaggcagtgcccct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 -taactaaatgaaggtgataagcgacagcttttccttacagagaaacaggcagtgcccct 316
Query: 121 aggtgacgcaatggtgcatgaatcacagctggaggcggaaccactgatggggcgaaaagc 180
||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aggcgac-----ggtgcatgaatcacagctggaggcggaaccactgatggggcgaaaagc 371
Query: 181 agagcaggaccagaaggaatatttgcatagtttataaaaatataacatcacgtggcattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 agagcaggaccagaaggaatatttgcatagtttataaaaatataacatcacgtggcattg 431
Query: 241 attaattaccatcagaaagccagcaactagggtggggag 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 432 attaattaccatcagaaagccagcaactagggtggggag 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 670
Length adjustment: 9
Effective length of query: 270
Effective length of database: 661
Effective search space: 178470
Effective search space used: 178470
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
