Query= MSMg01no211_m18.b1 MSMg01no211_m18.b1 CHROMAT_FILE:
MSMg01no211_m18.b1 PHD_FILE: MSMg01no211_m18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:37:16 2005
(357 letters)
>mm_chr15_95589215_95589971
Length = 757
Score = 613 bits (317), Expect = e-180
Identities = 344/353 (97%), Gaps = 2/353 (0%)
Strand = Plus / Plus
Query: 6 aattctatgaaggaagaacatatgtgcatatatataatatatgcgcataccaatgcatac 65
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aattctacgaaagaagaacatatgtgcatatatataatatatgcgcataccaatgcatac 265
Query: 66 -gaatgtaaacatatatacagtacagaatacataccataccaaactgtgagacagcatct 124
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aga-tgtaaacatatatacagtacagaatacataccataccaaactgtgagacagcatct 324
Query: 125 gtgttttaagttacccagcttaggacatccctagagagctcaggtacacttctggagata 184
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgtcttaagttacccagcttaggacatccctagagagctcaggtacacttctggagata 384
Query: 185 gttgtgtgaatgccatgtgtcgtaaagtggataacacccaggagcgttttggcatggtat 244
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 385 gttgtgtgaatgccatgtgtcgtaaaatggataacacccaggagcgttttggcatggtat 444
Query: 245 ggaggccggcgagtagacctgattgctcagtaggatccttaccttttaacccagccaacc 304
||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggaggccggtgagtagatctgattgctcagtaggatccttaccttttaacccagccaacc 504
Query: 305 tgcatgtctcacgcctagggacgccaggagtggccatacgagttagtctagac 357
||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 505 tgcatgtctcacgcctagggaagccaggagtggccatacgagttagtctagac 557
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 757
Length adjustment: 9
Effective length of query: 348
Effective length of database: 748
Effective search space: 260304
Effective search space used: 260304
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no211_m18.g1 MSMg01no211_m18.g1 CHROMAT_FILE:
MSMg01no211_m18.g1 PHD_FILE: MSMg01no211_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:37:16 2005
(323 letters)
>mm_chr15_95740611_95741333
Length = 723
Score = 563 bits (291), Expect = e-165
Identities = 315/323 (97%)
Strand = Plus / Minus
Query: 1 aggatcaaggatcttgggtggcgctgaattcccattcttgaggcagccctgaaacccctt 60
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 458 aggatcaaggatcttgggtggggctgaattcccattcatgaggcagccctgaaacccctt 399
Query: 61 ctggaacaagagtcttgggagtgggctggagtgttcgatcccagagctaggctgggagga 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 398 ctggaacaagagtcttgggagtgggctggagtgtttgatcccagagctaggctgggagga 339
Query: 121 acaaaagagaggcgggaggagctggtaacttggccacagctcctgtgctaaggcaatagt 180
||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 338 acaaaagagaggcaggaggagctggtaactcggccacagctcccatgctaaggcaatagt 279
Query: 181 atgactttaaaactatgcacaacacagctctctcactgatgacagatgagaagggtgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 atgactttaaaactatgcacaacacagctctctcactgatgacagatgagaagggtgaat 219
Query: 241 gaggtttttggaattctcttgtcttgttttgttttgttcgttgtgttgtgttttgttttg 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gaggtttttgggattctcttgtcttgttttgttttgttcgttgtgttgtgttttgttttg 159
Query: 301 cttggctttgccttgtttttgca 323
|||||||||||||||||||||||
Sbjct: 158 cttggctttgccttgtttttgca 136
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
