Query= MSMg01no214_i04.b1 MSMg01no214_i04.b1 CHROMAT_FILE:
MSMg01no214_i04.b1 PHD_FILE: MSMg01no214_i04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:51 2005
(292 letters)
>mm_chr15_59697535_59698224
Length = 690
Score = 487 bits (252), Expect = e-142
Identities = 280/290 (96%), Gaps = 4/290 (1%)
Strand = Plus / Minus
Query: 1 tcttttctctacatcaggactggtcttgatgtctcaacaaggttttcagcgccccgctcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tcttttctctacatcaggactggtcttgatgtctcaacaaggttttcagcgccccgctcg 553
Query: 61 gctccacacccgccccaccccactccactctaccccactagccccacccccacccccacc 120
||||| | |||| ||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 552 gctccgctcccg-cccacccaactccactctaccccactagccccaccccca-ccccacc 495
Query: 121 cccgacccagcgctgttcccaactgccctacaggtcggctttctcccaatcaaggacaca 180
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 cccgatccagcgcttttcccaactgccctacaggtcggctttctcccaatcaaggacaca 435
Query: 181 gcccatatcttttttgatttgttcccccaaagccaggagcctggctggaacttttcaaaa 240
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 434 gcccatatctttttttatttgttcccccaaagccaggagcctggctggaacttttc--aa 377
Query: 241 aataatctaggttatttaaaggatggtgagggttctgggcggggacttca 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aataatctaggttatttaaaggatggtgagggttctgggcggggacttca 327
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 690
Length adjustment: 9
Effective length of query: 283
Effective length of database: 681
Effective search space: 192723
Effective search space used: 192723
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no214_i04.g1 MSMg01no214_i04.g1 CHROMAT_FILE:
MSMg01no214_i04.g1 PHD_FILE: MSMg01no214_i04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:51 2005
(289 letters)
>mm_chr15_59668935_59669623
Length = 689
Score = 536 bits (277), Expect = e-157
Identities = 286/289 (98%)
Strand = Plus / Plus
Query: 1 ctcctccccacaccttcttctcctcttcctttgttctttcatctatccaggcaaccaccc 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcctccccacaccttcctctcctcttcctttgttctttcatctatccaggcaaccaccc 260
Query: 61 catctgttcttgcttattgcttcccatataccaagtactgcatttagctccgggggagga 120
||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 catatgttcttgcttattgcttcccatataccaagtactgcgtttagctccgggggagga 320
Query: 121 gatgatgcccctactcccagacaggcaaagctttatgggagacagagacacacaaactgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatgatgcccctactcccagacaggcaaagctttatgggagacagagacacacaaactgg 380
Query: 181 tggttattgcaggctgatcggtgccatgatagggggatgatgggactacaggtgtcctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggttattgcaggctgatcggtgccatgatagggggatgatgggactacaggtgtcctct 440
Query: 241 ggagaggagccacactggcctggagtgaaagtagagagacctggcacct 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggagaggagccacactggcctggagtgaaagtagagagacctggcacct 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
