Query= MSMg01no217_c13.b1 MSMg01no217_c13.b1 CHROMAT_FILE:
MSMg01no217_c13.b1 PHD_FILE: MSMg01no217_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:31 2005
(413 letters)
>mm_chr15_28460145_28460957
Length = 813
Score = 692 bits (358), Expect = 0.0
Identities = 391/406 (96%), Gaps = 8/406 (1%)
Strand = Plus / Minus
Query: 16 gaattc-accattagataagagagcattctagggactgcacagcgttttaaagaaaagga 74
|||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 774 gaattcaaccattagataagagagtagcctagggactgcacagcgttttaaagaaaagga 715
Query: 75 gctgactctaatgtctttttgttttcaggctgtaataacagacgtcctaggataaatgat 134
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 gctgactccactgtctttttgttttcaggctgtaataacagacgtcctaggataaatgat 655
Query: 135 tcagaaatgatgggacttccttcactcaccattt-------ggcaaatccaaaattaaaa 187
||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 654 tcagaaatgatgggacttcattcactcaccatttgtaggccggcaaatccaaaattaaaa 595
Query: 188 catatatccagttactttgccaagagagctactctctgattcaagatggcatcttttcgt 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 catatatccagttactttgccaagagagctactctctgattcaagatggcatcttttcgt 535
Query: 248 ggcttctacatgtgacaataggacagagagtagaagggtctttaggttacttttgagtga 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ggcttctacatgtgacaataggacagagagtagaagggtctttaggttacttttgagtga 475
Query: 308 cttagatcatcttatccacgctagacagcatagctccactgagctgccccctttccttta 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 cttagatcatcttatccacgctagacagcatagctccactgagctgccccctttccttta 415
Query: 368 ccctttgatcttttcataaaggatgaatctgattcttgagagcaga 413
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ccctctgatcttttcataaaggatgaatctgattcttgagagcaga 369
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no217_c13.g1 MSMg01no217_c13.g1 CHROMAT_FILE:
MSMg01no217_c13.g1 PHD_FILE: MSMg01no217_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:31 2005
(383 letters)
>mm_chr15_28368994_28369777
Length = 784
Score = 671 bits (347), Expect = 0.0
Identities = 374/383 (97%), Gaps = 1/383 (0%)
Strand = Plus / Plus
Query: 2 tcccatggcccttac-aaaacattccattcctaaataaaatctacatggtcctctggaag 60
|||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 202 tcccatagcccttacaaaaacattcaattcctaaataaaatctacatggtcctctggaag 261
Query: 61 taagttataccctttggaatttgtatctttgtgagtccttttaaaatttattactacata 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 262 taagttataccctttggaatttgtatctttgtgagtccttttaaaatttattactagata 321
Query: 121 agttctacaaagtgcatacacttggtccccattccctatcagcagtataaggttacaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 agttctacaaagtgcatacacttggtccccattccctatcagcagtataaggttacaaat 381
Query: 181 gatgctcttcattttgtctgctatgatgctccacagcaggggatgttaggtgggttggct 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 382 gatgctcttcattttgtctgctatgatgctccacagcaggggatgtcaggtgggttggct 441
Query: 241 acaagaataccatactgttagaaggtttctaattctatatacacagtgatgtctaaaaaa 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 acaagaataccacactgttagaaggtttctaattctatatacacagtgatgtctaaaaaa 501
Query: 301 catgccacaaaggaaggtcagtccatatgaggttttttctgagttcatttccctgcactt 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 502 catgccacaaaggaaggtcagtccatatgaggtagcttctgagttcatttccctgcactt 561
Query: 361 attccaaacttgagcctgttaaa 383
|||||||||||||||||||||||
Sbjct: 562 attccaaacttgagcctgttaaa 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 784
Length adjustment: 9
Effective length of query: 374
Effective length of database: 775
Effective search space: 289850
Effective search space used: 289850
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
