Query= MSMg01no217_d06.b1 MSMg01no217_d06.b1 CHROMAT_FILE:
MSMg01no217_d06.b1 PHD_FILE: MSMg01no217_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:36 2005
(320 letters)
>mm_chr15_102241103_102241822
Length = 720
Score = 590 bits (305), Expect = e-173
Identities = 314/317 (99%)
Strand = Plus / Minus
Query: 4 ggaattccagcctcaggaaatcagatgacctcttccagactccaggggcacccacccatc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ggaattccagcctcaggaaatcagatgacctcttccagactccaggggcacccacccatc 461
Query: 64 caaactgcataaatataccgatataaacacatacatataaataacattttagggaaaaaa 123
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 caaactgcataaatatacagatataaacacatacatataaataacattttagggaaaaaa 401
Query: 124 agcaagaaagaaaagatctttctgaaatccattaagccattttcccctcagttcaactca 183
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 400 agcaagaaagaaaagatctttctgaaatccattaagccatttttccctcagttcaactca 341
Query: 184 tgagaaaactgttcaagttgaatcatcacaatctgtaacctacttggccagaaccaggtt 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 340 tgagaaaactgttcaagttgaatcatcacaatctgtaacctacttggccagaactaggtt 281
Query: 244 cctgaaccaaaatgttaaggaactgcttgctgcctcctgctcctgacacttgagaagcag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 cctgaaccaaaatgttaaggaactgcttgctgcctcctgctcctgacacttgagaagcag 221
Query: 304 atactacctcagttgta 320
|||||||||||||||||
Sbjct: 220 atactacctcagttgta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no217_d06.g1 MSMg01no217_d06.g1 CHROMAT_FILE:
MSMg01no217_d06.g1 PHD_FILE: MSMg01no217_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:36 2005
(248 letters)
>mm_chr15_102125852_102126499
Length = 648
Score = 418 bits (216), Expect = e-121
Identities = 240/248 (96%), Gaps = 2/248 (0%)
Strand = Plus / Plus
Query: 1 ttccctttactcttcactcaact-tgatagcctttcttatacaacccatgtaacatgtag 59
||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||
Sbjct: 201 ttccctttactcttcactcaactct-atagcctttcttatacaacccatgtaagatgtag 259
Query: 60 gctggaatccaaacttgggagggaggagaacctaggagaacccggaagttgtccctgcac 119
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 260 gctggaatccaaacttgggagggaggagaacctaggagaacccggaggttgtccctgcac 319
Query: 120 ccttttcagtgtgaatctccacaaagtcagagttttaaagaatcccaaagaccctgtgtg 179
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccttttcagtgtccctctccacaaagtcagagttttaaagaatcccaaagaccctgtgtg 379
Query: 180 gtggtgtactccttcaaccccagcattaggcaggtggatctctcttagaggccagcctgg 239
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtggtgtacaccttcaaccccagcattaggcaggtggatctctcttagaggccagcctgg 439
Query: 240 tctattta 247
||||||||
Sbjct: 440 tctattta 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
