Query= MSMg01no217_o09.b1 MSMg01no217_o09.b1 CHROMAT_FILE:
MSMg01no217_o09.b1 PHD_FILE: MSMg01no217_o09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:45:43 2005
(428 letters)
>mm_chr15_75986977_75987804
Length = 828
Score = 760 bits (393), Expect = 0.0
Identities = 406/411 (98%), Gaps = 2/411 (0%)
Strand = Plus / Plus
Query: 16 gaattcagcaagcagggctctgatgggggcgtgggaatcgtccactgtgtgcttggtgtt 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gaattcagcaagcagggctctgatgggggcgtgggaatcgtccactgtgtgcttggtgtt 275
Query: 76 cccaatctgttacgttctcatagacagaaatgtccctgtcccagcatttgggtacctaga 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 cccaatctgttacgttctcatagacagaaatgtccctgtcccagcatttgggtacctaga 335
Query: 136 ggccccattagggaagggttatacagggttatataagtgacaaatgcctgtaaccccagc 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ggccccattagggaagggttatacagggttatataagtgacaaatgcctgtaaccccagc 395
Query: 196 atgtagagagttgaagtaggagggtcaagttcaaggccagcttgggctacacgatgaggt 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 atgtagagagttgaagtaggagggtcaagttcaaggccagcttgggctacacgatgaggt 455
Query: 256 caaggctagcttgtgtgtactaagaccttctcagagagaaggaagaagaaaaaaaaagac 315
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||
Sbjct: 456 caaggctagcttgtgtgtactaagaccttctcagagagaaagaag--gaaaaaaaaatac 513
Query: 316 agataaaagattcacccacccccatgccccgtatgtcagtttacagatgatggttgactt 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 agataaaagattcacccacccccatgccccgtatgtcagtttacagatgatggttgactt 573
Query: 376 ccaagagctcctgcagatgagcaattgactttgcaatgcatagatttaaga 426
||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 574 ccaagagctcctgcagatgagcaattgactttgtaatgcatagatttaaga 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no217_o09.g1 MSMg01no217_o09.g1 CHROMAT_FILE:
MSMg01no217_o09.g1 PHD_FILE: MSMg01no217_o09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:45:44 2005
(275 letters)
>mm_chr15_75990711_75991385
Length = 675
Score = 524 bits (271), Expect = e-153
Identities = 274/275 (99%)
Strand = Plus / Minus
Query: 1 agagttccaggcaagaagatctcaaagtcaagtcctgcctggactatttagcaagaccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 agagttccaggcaagaagatctcaaagtcaagtcctgcctggactatttagcaagaccct 487
Query: 61 gtctcagaaaatgaaagaaagataaggaagaacttacctgatatgttcaaggccctgggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gtctcagaaaatgaaagaaagataaggaagaacttacctgatatgttcaaggccctgggt 427
Query: 121 tcaacctggaggttaagcttagtgaaattaaatatatttgaattgtctttattgcttgaa 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 426 tcaacctggaggttaagcttagtgaaattaaatgtatttgaattgtctttattgcttgaa 367
Query: 181 ctttgctgtgtgtgtgacacaagtaaatatgaattagctgaatttggtcactaatagctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ctttgctgtgtgtgtgacacaagtaaatatgaattagctgaatttggtcactaatagctt 307
Query: 241 ggcgttaagatattagagttttgttgtcttttaag 275
|||||||||||||||||||||||||||||||||||
Sbjct: 306 ggcgttaagatattagagttttgttgtcttttaag 272
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 275
Length of database: 675
Length adjustment: 9
Effective length of query: 266
Effective length of database: 666
Effective search space: 177156
Effective search space used: 177156
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
