Query= MSMg01no218_k04.b1 MSMg01no218_k04.b1 CHROMAT_FILE:
MSMg01no218_k04.b1 PHD_FILE: MSMg01no218_k04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:42 2005
(673 letters)
>mm_chr15_91772545_91773618
Length = 1074
Score = 1185 bits (613), Expect = 0.0
Identities = 652/667 (97%), Gaps = 5/667 (0%)
Strand = Plus / Minus
Query: 5 gaattcattacacgtggctagaatttgcataggaagtctccagaacagagaatttcatta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gaattcattacacgtggctagaatttgcataggaagtctccagaacagagaatttcatta 604
Query: 65 tctttgcgcatgcaggcactggtgttatatcttgactaatgataaatatagtcagcactg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tctttgcgcatgcaggcactggtgttatatcttgactaatgataaatatagtcagcactg 544
Query: 125 ctcagttatttcttctctacaggaatagacttcaagtgtgtttccttgcaaattcggatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ctcagttatttcttctctacaggaatagacttcaagtgtgtttccttgcaaattcggatt 484
Query: 185 cccaagtttactgaaagaaattagcttttggcaattaagaacagtcgaaattagctatag 244
|| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 483 cctaagtttactgaaagaaattagcttttggtaattaagaacagtcaaaattagctatag 424
Query: 245 aatttcatctatgttactgaccaataatcctaacaggaaa-ttaaaatggatacaaatag 303
||||||||||||||||||||||||||| |||||||| ||| |||||||||| ||||||||
Sbjct: 423 aatttcatctatgttactgaccaataaccctaacagcaaaattaaaatggacacaaatag 364
Query: 304 ggatggagggacggctcattcatgaaaggctaggctcataaccaaaactataaaatgggc 363
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 363 ggatggagggacggctcagccatgaaaggctaggctcataaccaaaactataaaatggac 304
Query: 364 aaaggtaatttcaaagacaaattattccatcttgtaaaactgacctggtgtcacagggct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aaaggtaatttcaaagacaaattattccatcttgtaaaactgacctggtgtcacagggct 244
Query: 424 gtagtcctgcctacagagaaactcctgggggccacactacttgcctagaatacgtgaggt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gtagtcctgcctacagagaaactcctgggggccacactacttgcctagaatacgtgaggt 184
Query: 484 gttgggtttgatccccagtactgagagcaaatatgggatacgatgaaggaacgcagttaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gttgggtttgatccccagtactgagagcaaatatgggatacgatgaaggaacgcagttaa 124
Query: 544 ctgattttttttcttttttcataaagctcctttaagacagtgccagccccccatccccca 603
|||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 123 ctgatttttttt----tttcataaagctcctttaagacagtgccagccccccacccccca 68
Query: 604 ccccatcataggaggagtgcaaacaaactgatttcaatgtttgtcacttttgccttttca 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 ccccatcataggaggagtgcaaacaaactgatttcaatgtttgtcacttttgccttttca 8
Query: 664 tttcaca 670
|||||||
Sbjct: 7 tttcaca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1074
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1064
Effective search space: 705432
Effective search space used: 705432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no218_k04.g1 MSMg01no218_k04.g1 CHROMAT_FILE:
MSMg01no218_k04.g1 PHD_FILE: MSMg01no218_k04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:43 2005
(294 letters)
>mm_chr15_91748925_91749618
Length = 694
Score = 551 bits (285), Expect = e-161
Identities = 291/293 (99%)
Strand = Plus / Plus
Query: 1 tcttactgttccattaagttgtttgcaatgacaacttagttttttaccctccccactgtt 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttactgttccattaagttgttagcaatgacaacttagttttttaccctccccactgtt 260
Query: 61 gtcccacaagctgagaaggaacccagtctatttgcagggtaaaccccaagttttcagtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcccacaagctgagaaggaacccagtctatttgcagggtaaaccccaagttttcagtgt 320
Query: 121 ttcaaagaaccttggagtttctactaggacatgggggatttgtattttaataggctaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcaaagaaccttggagtttctactaggacatgggggatttgtattttaataggctaagc 380
Query: 181 tagtggctctgagatctatgaagggttaaggctaactggtgatgagtaagaattgttatc 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagtggctcttagatctatgaagggttaaggctaactggtgatgagtaagaattgttatc 440
Query: 241 atacaccattccggagcacaggattcagtcagaaattggatgaggacctgatg 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atacaccattccggagcacaggattcagtcagaaattggatgaggacctgatg 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
