Query= MSMg01no218_o13.b1 MSMg01no218_o13.b1 CHROMAT_FILE:
MSMg01no218_o13.b1 PHD_FILE: MSMg01no218_o13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:03 2005
(318 letters)
>mm_chr15_99576224_99576940
Length = 717
Score = 576 bits (298), Expect = e-169
Identities = 310/314 (98%), Gaps = 1/314 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaactagggaaagtcaaggtagtagttgggacaaaactgatctttacaaagcca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaactagggaaagtcaaggtagtagttgggacaaaactgatctttacaaagcca 264
Query: 65 gcatcagctttgaacctttgttcacagagtcccacaaaaacacattttcctattagaccc 124
|| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 265 gcgtcagctttgaatctttgttcacggagtcccacaaaaacacattttcctattagaccc 324
Query: 125 ttcacagtacccaatttccaaattgcatgtcagtgactaatagccatttctagagaatta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttcacagtacccaatttccaaattgcatgtcagtgactaatagccatttctagagaatta 384
Query: 185 aaaactttgatttcaagtacaatattcctaagcaaggaaaaacttcccacaaaaatgtaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaactttgatttcaagtacaatattcctaagcaaggaaaaacttcccacaaaaatgtaa 444
Query: 245 atatagaacaagctggtagtatttctgtcaaggtgggctttttaaaaaaaacagatatat 304
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 445 atatagaacaagctggtagtatttctgtcaaggtgggctttttaaaaaaa-cagatatat 503
Query: 305 tttaatattaactt 318
||||||||||||||
Sbjct: 504 tttaatattaactt 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 717
Length adjustment: 9
Effective length of query: 309
Effective length of database: 708
Effective search space: 218772
Effective search space used: 218772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no218_o13.g1 MSMg01no218_o13.g1 CHROMAT_FILE:
MSMg01no218_o13.g1 PHD_FILE: MSMg01no218_o13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:03 2005
(289 letters)
>mm_chr15_99664561_99665249
Length = 689
Score = 522 bits (270), Expect = e-153
Identities = 282/286 (98%)
Strand = Plus / Minus
Query: 1 tggcgctacacttgagagatggtaagaaagtccagtgaggagcacgtgcccagcgcaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tggcgctacacttgagagatggtaagaaagtccagtgaggagcacgtgcccagcgcaggt 358
Query: 61 atggccatagatttaatcctgcacgctgcaagaaggttgggtctcttgagcttcacagcc 120
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 357 atggccataggtttaatcctgcacgctgcaggaaggttgggtctcttgagcttcacagcc 298
Query: 121 tctgtggtagcctgtgctaccacacagaagaagggtcagtgaagcccagaaggtggagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tctgtggtagcctgtgctaccacacagaagaagggtcagtgaagcccagaaggtggagtc 238
Query: 181 tagcttgaaccacacagagaaacgccatcttaaggaggaagagatggatcagtgattaag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 237 tagcttgaaccacacagagaaacgccatcttaaggaggaagagatggatcagtggttaag 178
Query: 241 gacaccagctgctcttctagcagtcacaggttcagttcccaacatc 286
||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 177 gacaccagctgctcttctagcagacacaggttcagttcccaacatc 132
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
