Query= MSMg01no231_i21.b1 MSMg01no231_i21.b1 CHROMAT_FILE:
MSMg01no231_i21.b1 PHD_FILE: MSMg01no231_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:52 2005
(146 letters)
>mm_chr15_67452119_67452664
Length = 546
Score = 265 bits (137), Expect = 8e-76
Identities = 140/141 (99%)
Strand = Plus / Minus
Query: 5 gaattccattaaatttgtattaaagtgagacgtgtatgtcttctggaagcattgaggttt 64
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 345 gaattccattaaatttgtattaaagtgagacctgtatgtcttctggaagcattgaggttt 286
Query: 65 cactgtatttcttccttctgaattcttacttgtgttgaagctgttctgtgcccatcattg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 cactgtatttcttccttctgaattcttacttgtgttgaagctgttctgtgcccatcattg 226
Query: 125 tggaggaaattgactggccaa 145
|||||||||||||||||||||
Sbjct: 225 tggaggaaattgactggccaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 146
Length of database: 546
Length adjustment: 8
Effective length of query: 138
Effective length of database: 538
Effective search space: 74244
Effective search space used: 74244
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no231_i21.g1 MSMg01no231_i21.g1 CHROMAT_FILE:
MSMg01no231_i21.g1 PHD_FILE: MSMg01no231_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:52 2005
(646 letters)
>mm_chr15_67448400_67449444
Length = 1045
Score = 1203 bits (622), Expect = 0.0
Identities = 640/646 (99%), Gaps = 1/646 (0%)
Strand = Plus / Plus
Query: 1 cctgttgttgtggaagattaaagtatacaagtgaaactttgcttctacttaaaagtaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgttgttgtggaagattaaagtatacaagtgaaactttgcttctacttaaaagtaaaa 260
Query: 61 ctccaattaaacaaaaaaaactaaaactgccctcttcttaatttcatagtttttattcct 120
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 ctccaattaaac-aaaaaaactaaaagtgccctcttcttaatttcatagtttttattcct 319
Query: 121 agatgtatctgcaagataggagtaatgactacactctcccatagaacctcatacaactga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agatgtatctgcaagataggagtaatgactacactctcccatagaacctcatacaactga 379
Query: 181 tgtgctgctgggtgagggaaatgttaccattcctaggaagttattcagttagtgacagga 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgtgttgctgggtgagggaaatgttaccattcctaggaagttattcagttagtgacagga 439
Query: 241 ttcctggcagctctaccttcttagcagagtagtaggcttgtaccaagttatctatcaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttcctggcagctctaccttcttagcagagtagtaggcttgtaccaagttatctatcaaca 499
Query: 301 ggtagggtgccacatgccctggagtctaattcatgtccaagaatatagatcccaagagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ggtagggtgccacatgccctggagtctaattcatgtccaagaatatagatcccaagagca 559
Query: 361 gaattccacacatactgtggtaaaggctgtactgacttgatcccctacatagagcctgag 420
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 560 gaattccacacatactgtggtaaaggctgcgctgacttgatcccctacatagagcctgag 619
Query: 421 gagcaagatgatatggcttttactggtataactgtctctttgagccttgcttaagtttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gagcaagatgatatggcttttactggtataactgtctctttgagccttgcttaagtttta 679
Query: 481 tattctgtagtttcagttacatggggctgaacacagtgcaaatgtattaaattcaaaatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tattctgtagtttcagttacatggggctgaacacagtgcaaatgtattaaattcaaaatt 739
Query: 541 ccataaataatcagttcacgggaattaaatgatgaacttttctgagtagcatgatgaaat 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ccataaataatcagttcacgagaattaaatgatgaacttttctgagtagcatgatgaaat 799
Query: 601 ctcatttggtcccatttcagtgtgcccaatgaatcacccttccact 646
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ctcatttggtcccatttcagtgtgcccaatgaatcacccttccact 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1045
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1035
Effective search space: 658260
Effective search space used: 658260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
