Query= MSMg01no231_n15.b1 MSMg01no231_n15.b1 CHROMAT_FILE:
MSMg01no231_n15.b1 PHD_FILE: MSMg01no231_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:13 2005
(236 letters)
>mm_chr15_32695746_32696381
Length = 636
Score = 379 bits (196), Expect = e-110
Identities = 230/252 (91%), Gaps = 17/252 (6%)
Strand = Plus / Minus
Query: 2 actttccactagggggcaggcatggctcactcattttgaacact---------------- 45
|||||||||||||||||| |||||| ||||||||||| ||||||
Sbjct: 497 actttccactagggggcaagcatggttcactcattttaaacactaatagggaacagtgta 438
Query: 46 -agatctgagcactttctcttataagtcagacccacagcggctgcagtggaaaacaggtt 104
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gagatctgagcactttctcttataagtcagacccacagcggctgcagtggaaaacaggtt 378
Query: 105 tccaaaacagtaaacaccaaacaggccattattatctttgtagttcatgagctgagttgt 164
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 377 tccaaaacagtagacaccaaacagaccattattatctttgtagttcatgagctgagttgt 318
Query: 165 attttacttagaggtataattggatcccacacaattgtgcctctcacatttcaggtgtgt 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 attttacttagaggtataattggatcccacacaattgtgcctctcacatttcaggtgtgt 258
Query: 225 cttcctacctga 236
||||||||||||
Sbjct: 257 cttcctacctga 246
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no231_n15.g1 MSMg01no231_n15.g1 CHROMAT_FILE:
MSMg01no231_n15.g1 PHD_FILE: MSMg01no231_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:13 2005
(286 letters)
>mm_chr15_32543407_32544092
Length = 686
Score = 545 bits (282), Expect = e-160
Identities = 285/286 (99%)
Strand = Plus / Plus
Query: 1 tcagaggagggaggtagaaagggaatgactttatcgcattcccgctgttccaggatctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 tcagaggagggaggtagaaagggaatgactttatcgcattcccgctgttccaggatccga 260
Query: 61 atattttgcagcattctgctgaagcttatgtagtccatctgttgctaccgagccatatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atattttgcagcattctgctgaagcttatgtagtccatctgttgctaccgagccatatca 320
Query: 121 tatggcttggcttcatggacttaagaacagttgtcatggtgctggagtgaaaacatccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatggcttggcttcatggacttaagaacagttgtcatggtgctggagtgaaaacatccct 380
Query: 181 gtgtttgttctgtttaggtaaaactcagcagggtacatgtagtctatggactttcatcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtttgttctgtttaggtaaaactcagcagggtacatgtagtctatggactttcatcca 440
Query: 241 ctaattcttgagttaaagcagtatgtcttttgcctggatgtacttc 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaattcttgagttaaagcagtatgtcttttgcctggatgtacttc 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
