Query= MSMg01no232_e10.b1 MSMg01no232_e10.b1 CHROMAT_FILE:
MSMg01no232_e10.b1 PHD_FILE: MSMg01no232_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:43 2005
(232 letters)
>mm_chr15_100169991_100170620
Length = 630
Score = 340 bits (176), Expect = 3e-98
Identities = 213/226 (94%), Gaps = 4/226 (1%)
Strand = Plus / Minus
Query: 5 gaattcccatctgttctgtggagttctgtgatgacgctggtgtgtcaggtgcacttatac 64
|||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||
Sbjct: 427 gaattcccatctgttctgtgcagttctgtgatgacgctggtgtgtaaagtgcacttatac 368
Query: 65 gagctgtggcgtgcaggacaatgcagcagccagtggcaaaaccctgag-ctgaaggacag 123
||||||||| |||||||||| |||||||||||||||||||||||| || | |||||||||
Sbjct: 367 gagctgtggagtgcaggacagtgcagcagccagtggcaaaaccctcagtc-gaaggacag 309
Query: 124 agagccactggggccagagcacaggtggcagccaaagcagactagtaacaccaggatagc 183
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 308 agagccact--ggccagagcacaggtggcagccaaagcagactagtaacaccaggacagc 251
Query: 184 aagtgggttctgattccttcttcccgggatgggggagggaaggagg 229
|||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 250 aagtgggttctgattccttcttaccaggatgggggagggaaggagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 630
Length adjustment: 9
Effective length of query: 223
Effective length of database: 621
Effective search space: 138483
Effective search space used: 138483
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no232_e10.g1 MSMg01no232_e10.g1 CHROMAT_FILE:
MSMg01no232_e10.g1 PHD_FILE: MSMg01no232_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:44 2005
(237 letters)
>mm_chr15_99967558_99968194
Length = 637
Score = 456 bits (236), Expect = e-133
Identities = 236/236 (100%)
Strand = Plus / Plus
Query: 1 tgtatggttgaactgtcctattctgttaggagggcttctgtgttcctatcgataggaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtatggttgaactgtcctattctgttaggagggcttctgtgttcctatcgataggaatt 260
Query: 61 ttggctagagtaaccgggaatatttcctttgataccagtgtctaggtgagggttctcatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggctagagtaaccgggaatatttcctttgataccagtgtctaggtgagggttctcatg 320
Query: 121 agggacaggtgggtggctcagtgttctcggacctgatgctgtgactccaatcctactctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agggacaggtgggtggctcagtgttctcggacctgatgctgtgactccaatcctactctg 380
Query: 181 tggttcaagcctcccaaaggcgtgtcagcaggtgtagaggggtggcggggtggcgg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggttcaagcctcccaaaggcgtgtcagcaggtgtagaggggtggcggggtggcgg 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
