Query= MSMg01no232_g11.b1 MSMg01no232_g11.b1 CHROMAT_FILE:
MSMg01no232_g11.b1 PHD_FILE: MSMg01no232_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:53 2005
(230 letters)
>mm_chr15_100169990_100170617
Length = 628
Score = 319 bits (165), Expect = 8e-92
Identities = 211/227 (92%), Gaps = 4/227 (1%)
Strand = Plus / Minus
Query: 5 gaattcccatctgctctgtggagttctgtgatgacgctggtgtgtcaggtgcacttatac 64
||||||||||||| |||||| |||||||||||||||||||||||| | ||||||||||||
Sbjct: 428 gaattcccatctgttctgtgcagttctgtgatgacgctggtgtgtaaagtgcacttatac 369
Query: 65 gagctgtggcccgcaggacaatgcagcagccagtggcaaaaccctgag-ctgaaggacag 123
||||||||| |||||||| |||||||||||||||||||||||| || | |||||||||
Sbjct: 368 gagctgtggagtgcaggacagtgcagcagccagtggcaaaaccctcagtc-gaaggacag 310
Query: 124 agagccactggggccagagcacaggtggcagccaaagcagactagtaacaccaggatagc 183
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 309 agagccact--ggccagagcacaggtggcagccaaagcagactagtaacaccaggacagc 252
Query: 184 aagtgggttctgattccttcttcccgggatgggggagggaaggaggt 230
|||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 251 aagtgggttctgattccttcttaccaggatgggggagggaaggaggt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 628
Length adjustment: 9
Effective length of query: 221
Effective length of database: 619
Effective search space: 136799
Effective search space used: 136799
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no232_g11.g1 MSMg01no232_g11.g1 CHROMAT_FILE:
MSMg01no232_g11.g1 PHD_FILE: MSMg01no232_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:53 2005
(240 letters)
>mm_chr15_99967558_99968197
Length = 640
Score = 464 bits (240), Expect = e-135
Identities = 240/240 (100%)
Strand = Plus / Plus
Query: 1 tgtatggttgaactgtcctattctgttaggagggcttctgtgttcctatcgataggaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtatggttgaactgtcctattctgttaggagggcttctgtgttcctatcgataggaatt 260
Query: 61 ttggctagagtaaccgggaatatttcctttgataccagtgtctaggtgagggttctcatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggctagagtaaccgggaatatttcctttgataccagtgtctaggtgagggttctcatg 320
Query: 121 agggacaggtgggtggctcagtgttctcggacctgatgctgtgactccaatcctactctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agggacaggtgggtggctcagtgttctcggacctgatgctgtgactccaatcctactctg 380
Query: 181 tggttcaagcctcccaaaggcgtgtcagcaggtgtagaggggtggcggggtggcgggaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggttcaagcctcccaaaggcgtgtcagcaggtgtagaggggtggcggggtggcgggaag 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
