Query= MSMg01no233_g01.b1 MSMg01no233_g01.b1 CHROMAT_FILE:
MSMg01no233_g01.b1 PHD_FILE: MSMg01no233_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:04 2005
(699 letters)
>mm_chr15_59100786_59101884
Length = 1099
Score = 1280 bits (662), Expect = 0.0
Identities = 677/682 (99%), Gaps = 1/682 (0%)
Strand = Plus / Plus
Query: 18 ggaattcctagtcatttttgcactgaaatccttagcttgccctgcaggcacatcgagatt 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ggaattcctagtcatttttgcactgaaatccttagcttgccctgcaggcacatcgagatt 277
Query: 78 cacctagtgtcaccgaacccccaagtcactgctcatttccagactcattcccatgtctgt 137
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 278 cacctagtgtcaccgaacccccaagtcactgctcatttccagactcattcccatgtctat 337
Query: 138 tttccccaagggtagtgtgactgagagggaacattggggatccacaggaagtaatcccag 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tttccccaagggtagtgtgactgagagggaacattggggatccacaggaagtaatcccag 397
Query: 198 caagtggtgcggtcctccccatcccacaagccagagtttgggagaccctgccctgaggag 257
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 398 caagtggtgtggtcctccccatcccacgagccagagtttgggagaccctgccctgaggag 457
Query: 258 ggcacttgtgtgccagttgtttgtagaggaagcaatggcagggccaagaaacacttctct 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ggcacttgtgtgccagttgtttgtagaggaagcaatggcagggccaagaaacacttctct 517
Query: 318 cagaatcactttcctcagcctttccaatcagcctagcaacaagagtaaaaaaaaaaaaaa 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 cagaatcactttcctcagcctttccaatcagcctagcaacaagagtaaaaaaaaaaaaaa 577
Query: 378 aaaaaaaccatgagctaaagctctggaaaacctgagcaaaatgaggtcacaggaagacag 437
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 aaaaaaac-atgagttaaagctctggaaaacctgagcaaaatgaggtcacaggaagacag 636
Query: 438 tgggatgggggagaagggagcatgctttccaaggagcaactatctcccgagcaacctcac 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 tgggatgggggagaagggagcatgctttccaaggagcaactatctcccgagcaacctcac 696
Query: 498 cagacagctttccaaacctgggagacaagcagttgtgtagatggggatagcccatgttct 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 cagacagctttccaaacctgggagacaagcagttgtgtagatggggatagcccatgttct 756
Query: 558 gcaagttctagggtcgggcatattaggagtttgaaagtgaaatcacaggatacctaattg 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gcaagttctagggtcgggcatattaggagtttgaaagtgaaatcacaggatacctaattg 816
Query: 618 tggtggacttgcttgcctgagcactgcagtccggttctcaggggagatttctctggtgct 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 tggtggacttgcttgcctgagcactgcagtccggttctcaggggagatttctctggtgct 876
Query: 678 ctgtttctggaagcctccttgg 699
||||||||||||||||||||||
Sbjct: 877 ctgtttctggaagcctccttgg 898
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1099
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1089
Effective search space: 750321
Effective search space used: 750321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no233_g01.g1 MSMg01no233_g01.g1 CHROMAT_FILE:
MSMg01no233_g01.g1 PHD_FILE: MSMg01no233_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:04 2005
(317 letters)
>mm_chr15_59182779_59183495
Length = 717
Score = 574 bits (297), Expect = e-168
Identities = 312/317 (98%)
Strand = Plus / Minus
Query: 1 cacgtgcgccatgttgctgttgatggctggagtattgttgggagtgatgttaatcactgg 60
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 cacgtgccccacgttgctgttgatggctggagtattgttgggagtgatgttaatcactgg 458
Query: 61 taaaagtactaggaaagctacatttgtacagaggagttcagtccaagctgcaggaatctg 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 taaaagtactaggaaacctacatttgtacagaggagttcagtccaagctgcaggaatctg 398
Query: 121 gctctcactgtgctttcctcgtttctgtcttaatagaaaatcttcaagcttggttcagag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 actctcactgtgctttcctcgtttctgtcttaatagaaaatcttcaagcttggttcagag 338
Query: 181 agatctcaaagcaaatactgtctctaaattatgatgattctactgctgcaggcagaaaaa 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 agatctcaaaacaaatactgtctctaaattatgatgattctactgctgcaggcagaaaaa 278
Query: 241 ctgtgcaactaatacaagctctggaagaggtaagaaagtccttttaaaccacagggcttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ctgtgcaactaatacaagctctggaagaggtaagaaagtccttttaaaccacagggcttg 218
Query: 301 ggctggagagtcggctc 317
|||||||||||||||||
Sbjct: 217 ggctggagagtcggctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
