Query= MSMg01no234_m02.b1 MSMg01no234_m02.b1 CHROMAT_FILE:
MSMg01no234_m02.b1 PHD_FILE: MSMg01no234_m02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:51:50 2005
(271 letters)
>mm_chr15_24920809_24921479
Length = 671
Score = 449 bits (232), Expect = e-130
Identities = 259/268 (96%), Gaps = 2/268 (0%)
Strand = Plus / Plus
Query: 5 gaattctaacatagttaaagctacatgtgggctcacattctgcctagcctgtgctgctat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaacatagttaaagctacatgtgggctcacattctgcctagcctgtgctgctat 264
Query: 65 tgttaagtgtgca-cttcgtggggtgggaaaacacagcctaagattcgggaggccaaaaa 123
||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgttaagtgtgcagct-catggggtgggaaaacacagcctaagattcgggaggccaaaaa 323
Query: 124 tggggttccctgactcccaggcatccagttgctgctggaaaacagagaggagttgggaac 183
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tggggttccctgattcccaggcatccagttgctgctggaaaacagagaggagttgggaac 383
Query: 184 ggaggttcaggggtccctggttttgcgatgaggaccctgggggataggagctctcaaacc 243
|||||||||||||||||||| ||| |||||||||||||||||| |||||||| ||||||
Sbjct: 384 ggaggttcaggggtccctgggcttgtgatgaggaccctgggggaaaggagctcccaaacc 443
Query: 244 tacacatccaggagccactgagtcgtgg 271
||||||||||||||||||||||||||||
Sbjct: 444 tacacatccaggagccactgagtcgtgg 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 671
Length adjustment: 9
Effective length of query: 262
Effective length of database: 662
Effective search space: 173444
Effective search space used: 173444
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no234_m02.g1 MSMg01no234_m02.g1 CHROMAT_FILE:
MSMg01no234_m02.g1 PHD_FILE: MSMg01no234_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:51:50 2005
(248 letters)
>mm_chr15_25074753_25075400
Length = 648
Score = 456 bits (236), Expect = e-133
Identities = 245/248 (98%)
Strand = Plus / Minus
Query: 1 agtgttttctcactctggtgagaaaaggttaaagtcagcccagggctctacctaaatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 agtgttttctcactctggtgagaaaaggttaaagtcagcccagggctctacctaaatatt 389
Query: 61 ccaggaaggtcttacctccaacattcatgtatttatctgaaacattccagagaaaaggca 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 388 ccaggaaggtcttacctccaacattcctgtatttatctgaaacattccagagaaaaggca 329
Query: 121 ccaggacactgggagggtcgaacatgccggattaaaatgtgtaattccaggcaggtccat 180
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 328 ccaggacactgggagggtcgaacatgctggattaaaatgtgtaattccaggcaggtccgt 269
Query: 181 ccctgtggtatggaggtcctttgccattggtctgaaacacaaagtgtgaatcgttagtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ccctgtggtatggaggtcctttgccattggtctgaaacacaaagtgtgaatcgttagtgt 209
Query: 241 ctgagtct 248
||||||||
Sbjct: 208 ctgagtct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
