CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTCTCTTCCTGTCTTCATGGTCTGCCTCTCCCCATTTAGGCACAGAG
TCCCGAGGTCACACATTGTTGTCACGTGCTACAGAGATCTTCTCTCTCTC
CATCACGTTCCATTTGGAACAGAGCTCAGCTAACCCTCTAACCCCAGTGG
AACACAGCAATACATTGATTTTTCTTTCTTTTTTTTGTAAATTACCATCT
CATTGATTTTCGCTCCCCTTCTCTCATTTATTATAAATAAGAGATAATCA
TTTGCTTATTTTGTGTCCCAGAAGTGGGGATAGGGAAGAGGTGGCTGTGT
CTCAGGGCCTGTGTGGAGATCAGAGGACAACTTACTCAGGCCCGTAGAAA
TCTGTTTTCTCCTTCTACCATGTGGGTCCAAACTCAGTTCATCAGGGTGG
ATGACTGAGTCATCTTGACAGCCCAAGATGTAGCTGAGAGTGGCCTTGAA
CGCCTCTTACTCCTCTTCAGCATATTCTACTGGAGTGAACCACTATAAGC
AGCGAAGCTCTGCTTTTATCCCCTTTTCTTCCTTCGTTAAATCTAGGTTC
CATTGTTTATGTCATCACCACTACCATCATCATTCACCACCACCACCATC
ATCATTATCATCACCACCATCATCATCATCATCACCACCATCATCTCACC
ACCTCATTCCCTTTCACTGTACACACCCTGAGA

GGTAGGAAGGGAAAGGGGGTTTAGTTAGAACGATAATAACGAAATACACG
AAGAAGTGGTAGGAATGAGTTCGTATGTATGCCGAAATAAGGGAGATATA
GAAGGATTTGACGAAAAGAATGGAGGAAGGGAGAGGGTGAGGACGGCCAG
GTTGAGGAGTTATATGCCCAAAAGAGGGAGAGGATATATTAAAGAAGGAA
AGAAAAGGGGGAGAGGTAGGTTAGATGGCTTAAATGGGAGGTTTAACAGG
TGATTGTTAAAGAGGAAGGAAGGAAAAGAAAAGATAAAGCTTGATGGAGA
TATTAGGTATTATTTAAAGGTTGTTGTATTAGGGGCGGGTTTTATTATTA
GAAGGGGAAGGAAATGTAAATAGGTGTTTTTTTACGGGTAGATTGTTTTG
TGAAGAGGGAGGTAGGAAGTATTTTTTTTTTACCCCCCCCGCCCCCCGGA
GATAGTGTTTAGATAATGACGGGGGGGTGAGGAGGAAGTTTAACACCATT
TAAAAAAAAAGTATATGGCGTATGCGGTAGGGGGGGGGAAAAAGGCGCGG
AGGGAGTAAAGTGTTGTTTAATTAATAGGGGGGGGGGCGAGGGAATGTTA
GTGGCGATATGTAGAATGAGGAGAGAAAGAAGGGGCGGGAAAGGGTGAAA
ATAAAAATAAGGGGAGGTACGACGGGGGGGAGTATATAAAGGATATATAG
GGGGGTATAAGGAGTATAAGGGGGGGTAAAAGAAGTATTGTTAGACGGTA
AAGCGAAAGAAGAGGATTGTGGCGCGGTAAGATAAAGATGACAGGTACCG
GAAATAAAGAATTATGATAGGCGGAACGGCGGAAAAATAGGAAAAGGTGG
TAAAGTTAGAGTAACAGGGATAAAGGGTGCGCGGAGGCATGTTTATTTAA
GTGCAGC

Query= MSMg01no234_o23.b1 MSMg01no234_o23.b1 CHROMAT_FILE:
MSMg01no234_o23.b1 PHD_FILE: MSMg01no234_o23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:05 2005
         (609 letters)



>mm_chr15_93759954_93760962
          Length = 1009

 Score = 1102 bits (570), Expect = 0.0
 Identities = 597/606 (98%), Gaps = 1/606 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcttctcttcctgtcttcatggtctgcctctccccatttaggcacagagtcccga 63
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttctcttcctgttttcatggtctgcctctccccatttaggcacagagtcccga 263

                                                                       
Query: 64  ggtcacacattgttgtcacgtgctacagagatcttctctctctccatcacgttccatttg 123
           ||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggtcacacattggcgtcatgtgctacagagatcttctctctctccatcacgttccatttg 323

                                                                       
Query: 124 gaacagagctcagctaaccctctaaccccagtggaacacagcaatacattgatttttctt 183
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gaacagagctcagctaatcctctaaccccagtggaacacagcaatacattgatttttctt 383

                                                                       
Query: 184 tcttttttttgtaaattaccatctcattgattttcgctccccttctctcatttattataa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcttttttttgtaaattaccatctcattgattttcgctccccttctctcatttattataa 443

                                                                       
Query: 244 ataagagataatcatttgcttattttgtgtcccagaagtggggatagggaagaggtggct 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ataagagataatcatttgcttattttgtgtcccagaagtggggatagggaagaggtggct 503

                                                                       
Query: 304 gtgtctcagggcctgtgtggagatcagaggacaacttactcaggcccgtagaaatctgtt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtgtctcagggcctgtgtggagatcagaggacaacttactcaggcccgtagaaatctgtt 563

                                                                       
Query: 364 ttctccttctaccatgtgggtccaaactcagttcatcagggtggatgactgagtcatctt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 564 ttctccttctaccatgtgggtccaaactcagttcatcagggtggatgactgagccatctt 623

                                                                       
Query: 424 gacagcccaagatgtagctgagagtggccttgaacgcctcttactcctcttcagcatatt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gacagcccaagatgtagctgagagtggccttgaacgcctcttactcctcttcagcatatt 683

                                                                       
Query: 484 ctactggagtgaaccactataagcagcgaagctctgcttttatccccttttcttccttcg 543
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 684 ctactggagtgaaccactataagcagtgaagctctgcttttatccccttttcttccttcg 743

                                                                       
Query: 544 ttaaatctaggttccattgtttatgtcatcaccactaccatcatcattcaccaccaccac 603
           ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 744 ttaaatctaggttccattgtttatgtcatcaccaccaccatcatcat-caccaccaccac 802

                 
Query: 604 catcat 609
           ||||||
Sbjct: 803 catcat 808


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space:   598401
Effective search space used:   598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)