Query= MSMg01no235_d19.b1 MSMg01no235_d19.b1 CHROMAT_FILE:
MSMg01no235_d19.b1 PHD_FILE: MSMg01no235_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:31 2005
(193 letters)
>mm_chr15_31513686_31514278
Length = 593
Score = 350 bits (181), Expect = e-101
Identities = 187/189 (98%)
Strand = Plus / Minus
Query: 5 gaattcatcacttctaaccaaatgagcagctgtgcttgctggggcagtgtggcaaagagc 64
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gaattcatcacttctaaggaaatgagcagctgtgcttgctggggcagtgtggcaaagagc 334
Query: 65 atgtatcagcctccatcctatagtgtgctggaccaaaactctttcccatcatgctgttgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 atgtatcagcctccatcctatagtgtgctggaccaaaactctttcccatcatgctgttgg 274
Query: 125 aaggacttcatctagagccaagtgaagtcatggtgggggagggagagggagagagggaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aaggacttcatctagagccaagtgaagtcatggtgggggagggagagggagagagggaag 214
Query: 185 gcaggagct 193
|||||||||
Sbjct: 213 gcaggagct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 593
Length adjustment: 8
Effective length of query: 185
Effective length of database: 585
Effective search space: 108225
Effective search space used: 108225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no235_d19.g1 MSMg01no235_d19.g1 CHROMAT_FILE:
MSMg01no235_d19.g1 PHD_FILE: MSMg01no235_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:31 2005
(288 letters)
>mm_chr15_31398792_31399477
Length = 686
Score = 499 bits (258), Expect = e-146
Identities = 279/288 (96%), Gaps = 6/288 (2%)
Strand = Plus / Plus
Query: 2 tacttattcagggagagaggaagcagcacgtgcatggtcaaggcagctctgtggtcagtc 61
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 202 tacttattcagggagagaggaagcagcacgtgcatggtcaaggcagctgtgtggtcagtc 261
Query: 62 ctggacagccagctcaggggagggcaacctttaatcataaactattctgagaaaggagtt 121
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctggacagc----tcaggggagggcaacctttaatcataaactattctgagaaaggagtt 317
Query: 122 tatatagcttttgtatcttaaaaccaagagtaaaagaaatcacttcaacaactttacatg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tatatagcttttgtatcttaaaaccaagagtaaaagaaatcacttcaacaactttacatg 377
Query: 182 ggttcctagaattaaaaaaaaaaa-tcttcctaaaacaactgtgtaaaataaacaaaaat 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 378 ggttcctagaattaaaaaaaaaaaatcttcctaaaacaactgtgtaaaataaacaaaaat 437
Query: 241 actcaaaatttattttttt-ctgatcccacataatcagcaataatcac 287
|||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 438 actcaaaaactattttttttctgatcccacataatcagcaataatcac 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 686
Length adjustment: 9
Effective length of query: 279
Effective length of database: 677
Effective search space: 188883
Effective search space used: 188883
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
