Query= MSMg01no237_p13.b1 MSMg01no237_p13.b1 CHROMAT_FILE:
MSMg01no237_p13.b1 PHD_FILE: MSMg01no237_p13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:55 2005
(670 letters)
>mm_chr15_17236645_17237714
Length = 1070
Score = 1222 bits (632), Expect = 0.0
Identities = 656/666 (98%), Gaps = 4/666 (0%)
Strand = Plus / Plus
Query: 5 gaattccttatgttacccaactaaacacaaatggactgactgaattgcactgactgaact 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gaattccttatgtaactcaactaaacacaaatggactgactgaattgcactgactgaact 268
Query: 65 gattcaattctttgttctctttctgttctgcttttaagtatcctttctttctagtcagtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gattcaattctttgttctctttctgttctgcttttaagtatcctttctttctagtcagtt 328
Query: 125 tttgagagaaatgagtgtattctgtctctgactcatttagccaataatttctctggttca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tttgagagaaatgagtgtattctgtctctgactcatttagccaataatttctctggttca 388
Query: 185 tcacttagaccactcctcaattagatgacactctcaaacaaactacaaacaaactgcttc 244
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 389 tcacttagaccactcctcaattagatgacactctcaaac----tacaaacaaactgcttc 444
Query: 245 cttctacaaaccaatttaaccttcatagtttggaattaaaggtatatactagaattgctt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cttctacaaaccaatttaaccttcatagtttggaattaaaggtatatactagaattgctt 504
Query: 305 atcatcaaactgctctccaacccacagctctgtctacctcggaggaggcctgcctgcagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atcatcaaactgctctccaacccacagctctgtctacctcggaggaggcctgcctgcagc 564
Query: 365 tatcaggcacagtgagtaccagaggcttactactcccaacaactactaagacagccaact 424
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tatcaggtacagtgagtaccagaggcttactactcccaacaactactaagacagccaact 624
Query: 425 ccttaaacaaccagctatcatgctatagcaaaccctggatatttgttgagcaagactgtg 484
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 625 ccttaaacaaccagctatcatgctatagcaagccctggatatttgtagagcaagactgtg 684
Query: 485 aactcatggttgaggtctttaaaaaaagataaaaatgaatctgttaaagaaataaagtaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aactcatggttgaggtctttaaaaaaagataaaaatgaatctgttaaagaaataaagtaa 744
Query: 545 aacacaataaggtgaaggaaatgaataaaacagtctatgacataaatatgcatataagag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aacacaataaggtgaaggaaatgaataaaacagtctatgacataaatatgcatataagag 804
Query: 605 caacaaagaaggcacaaatggaggcaaagctggagatgaaaaacctgggatagataacag 664
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 805 caacaaagaaggcacaaatggaggcaaagctggagatgaaaaacctgggaaagataacag 864
Query: 665 gaatta 670
||||||
Sbjct: 865 gaatta 870
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no237_p13.g1 MSMg01no237_p13.g1 CHROMAT_FILE:
MSMg01no237_p13.g1 PHD_FILE: MSMg01no237_p13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:55 2005
(639 letters)
>mm_chr15_17329078_17330116
Length = 1039
Score = 1112 bits (575), Expect = 0.0
Identities = 620/635 (97%)
Strand = Plus / Minus
Query: 1 tcaatttctatgacattcagcaagcaaacagaaagattagctagatgacctcataagctt 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 835 tcaatttctatgacattcagcaagcaaacagaaagattagctagatgagttcataagctt 776
Query: 61 tatgtatgaagcccatatgagtatgcttagataaatttgaaaagaaatctcagatggcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 tatgtatgaagcccatatgagtatgcttagataaatttgaaaagaaatctcagatggcta 716
Query: 121 ttggaaatattgtgatgagaagtaatttttcatagtacaatttcaaggcaattttataaa 180
|||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 715 ttggaaatgttgtgatgagaagtaatttttcacagtacaatttcaaagcaattttataaa 656
Query: 181 atgtctatgtacagcattctttgtaagcaaacctctatcaggctaaaaacacttgggaga 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 655 atgtctatgtacagcattctttgtaagaaaacctctatcaggctaaaaacacttggggga 596
Query: 241 agagatcgtagcttgagagcaatttccatggcaaagatgtttcagacttttattaggatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 agagatcgtagcttgagagcaatttccatggcaaagatgtttcagacttttattaggatg 536
Query: 301 tttaaagatgtctgcatgttctagttccttttactcttaaccctaagatttttcatgtca 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tttaaagatgtctacatgttctagttccttttactcttaaccctaagatttttcatgtca 476
Query: 361 aggaagaatcattaaaacttgtcaacctgaaacaaagcatatctattacctttgtaattt 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 475 aggaagaatcattaaaacttgtcaacctgaaacaaagcatgtctattacctttgtaattt 416
Query: 421 ttaatcactactttagtgtccaaagacaatgatgaattatgtatggggaataatttattt 480
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 415 ttaatcactactttagtgtccaaagtcaatgatgaattatgtatgggtaataatttattt 356
Query: 481 tgctattcatattttctttaaaaacagaatacataaacaaatctctattctgtttttaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tgctattcatattttctttaaaaacagaatacataaacaaatctctattctgtttttaga 296
Query: 541 atacattataataaagtataagtgttttaaatatcttaatataataataaccaacttcta 600
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 atacactataataaactataagtgttttaaatatcttaatataataataaccaacttcta 236
Query: 601 gattgcatccatgtgtcatcattagcctgtcatgg 635
|||||| |||||||||||||||||| |||||||||
Sbjct: 235 gattgcttccatgtgtcatcattagactgtcatgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
