TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCACAATGGTTCCAACTTAAGCATAGAACACCTCAAAGCCTACTCCA
CAGTTACATACTTCCTCCAACAAAGCCACACCTACTCCAACAAGGCCACA
CCCCCAAGAAGTGTCACCCTGTGGGTGAAGCATTCAAACATAGTAGTCTA
TTGGGGCCAAAACCTATTAAAACCACCACAGGGAGTGCTCACTCTCCATG
TCCTATCTCACCCCAACCACTGACAGATGAAGCACAACATGAGCTGGCAA
ACCTGAATTAGTTATTTGGCCCACTCTCACCTGAGCCAAATAACTAAATA
AATCCACAGATTTTTTTAAAAATCATGCAGTGAGAAACAGAGTTAATTGT
TTTAAAAAGCACAATTGCCGTGAACAGTAGATAGAATTGGTTAGGCAGTG
CTGGAACCAGTAACTGGGAGGCCCAGACACCAGAGAAGAGTTCTCTTTCC
TGGCTTCTTGTTTTCTATTCCTGACCCTGTTAGGAAGCAACACACAACAA
GTGAGTGTTGTGCCAACGGCACTGAGAAGCACATCCTCCAATTCCTCCTC
CCACTTTCTGTCCTAAATCTTTTAAAAAGCTCCCAGCTTGGAAACTCAGT
AGTATTTTATTCCTGGACACCCACTCCTGAGAGATAAGATATACATACCA
TATTCTCTACACTTAGGTGGCAATAACAAATAATTCTCTATT

CGAATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCAGGTTTATAAGCTTTGGTTGTGC
AAACCTTGTTCCGTGATTTAAAACAATTGCTTAAATGAAATTGGCTACAG
CCAATTACTGGAGGGATTGGAGGTAGGTGGGTTTTGNACNCCCCCNCCCC
GCCCCCCCTCACGCCTTCCTCGTCTCGCCCTTTTGATCTATCCCCCCTTC
CCTTCCCTCTGCTTTCCCCCTCCCTGTCGTCACTCCCTCTTCCCTCTCTC
CCCTTGCTTACCCCCATTCAAACCTTTTTTTTTTCCCTCTCTTACTCCCC
CTCTTCCCTCCTTCCCCCTTCCCCCCCTCCCCCCCTCCGCTTCTTTCCTC
GCTCTCTCTTTTCTTCCTCCCCCCCCCCCCCCCCCCTTCTTTTTCCTTCT
CCCCCCCCTTTTCCCTTCCCCCCCTCCTTCCCCCTTTTTCCCCCCCCCAC
CTTTTCCCCCCCCCTTCCCCCCCCCTCCTTTACTTCTCTCCCCCCCCTCC
CCCCATCCCCCTTCCCCCCTTTCCCTTTCCCGCCCTTCCCCCCCTATCTC
TTCTCCCCCCCCTCTTCTATCCCCCCCCTCTTTCCTCCAACTCCACCCCC
ACCCCCTCACACCCATCCCCCTCCCTCACCCCATTCACCCTCCATCCCCC
CTTCCCCCACCCCCCCCCCCTCCCCTCCCCTCTCCCCCCATTCCCCCTTT
CCCTCCCCTCTCCTCCTTCCCCCCCCTTACTTTCTTTCTCCCCCTTTCTC
TTCCTCGCCATCTAACCCCTTACCTCCCCTTCC

Query= MSMg01no260_d17.b1 MSMg01no260_d17.b1 CHROMAT_FILE:
MSMg01no260_d17.b1 PHD_FILE: MSMg01no260_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:16 2005
         (698 letters)



>mm_chr15_91303904_91305001
          Length = 1098

 Score = 1147 bits (593), Expect = 0.0
 Identities = 671/703 (95%), Gaps = 15/703 (2%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccacaat-ggttcc--aacttaagcatagaacacctcaaagcctactccacagt 60
           ||||||||||||| |||     ||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattccacaataggt---ggaacttaagcatagaacacctcaaagcctactccacagt 259

                                                                       
Query: 61  tacatacttcctccaacaaagccacacctactccaacaaggccacacccccaagaagtgt 120
           ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 260 tacatacttcctccaacaaggccacacctactccaacaaggccacacccccaaggagtgt 319

                                                                       
Query: 121 caccc-tgtgggtgaagcattcaaacatagtagtctattggggccaaaacctattaaaac 179
           ||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 320 cacccctgtgggccaagcattcaaacacagtagtctattggggccaaaacctattaaaac 379

                                                                       
Query: 180 caccacagggagtgctcactctccatgtcctatctcaccccaaccactgacagatgaagc 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caccacagggagtgctcactctccatgtcctatctcaccccaaccactgacagatgaagc 439

                                                                       
Query: 240 acaacatgagctggcaaacctgaattagttatttggcccactctcacctgagccaaataa 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acaacatgagctggcaaacctgaattagttatttggcccactctcacctgagccaaataa 499

                                                                       
Query: 300 ctaaataaatccacagatttttttaaaaa----tcatgcagtgagaaacagagttaattg 355
           ||||||||||||||||||||    |||||    |||||||||||||||||||||||||||
Sbjct: 500 ctaaataaatccacagattt----aaaaaaaaatcatgcagtgagaaacagagttaattg 555

                                                                       
Query: 356 ttttaaaaagcacaattgccgtgaacagtagatagaattggttaggcagtgctggaacca 415
           |||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tttttaaaagcacaattggtgtgaacagtagatagaattggttaggcagtgctggaacca 615

                                                                       
Query: 416 gtaactgggaggcccagacaccagagaagagttctctttcctggcttcttgttttctatt 475
           |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 616 gtaactgggaggcccagacaccagagaagagttctctttcttggcttcttggtttctatt 675

                                                                       
Query: 476 cctgaccctgttaggaagcaacacacaacaagtgagtgttgtgccaacggcactgagaag 535
           |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 cctgaccctgctaggaagctacacacaacaagtgagtgttgtgccaacggcactgagaag 735

                                                                       
Query: 536 cacatcctccaattcctcctcccactttctgtcctaaatcttttaaaaagctcccagctt 595
           |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 736 cacatcctccaattcctcctcccactttctgtcctaaatcctttacaaagctcccagctt 795

                                                                       
Query: 596 ggaaactcagtagtattttattcctggacacccactcctgagagataagatatacatacc 655
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ggaaactcagtagtattttatccctggacacccactcctgagagataagatatacatacc 855

                                                      
Query: 656 atattctctacacttaggtggcaataacaaataattctctatt 698
           ||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 856 atattctttacacttaagtggcaataacaaataattctctatt 898


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1098
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1088
Effective search space:   748544
Effective search space used:   748544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)