NNNNTTCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCAAATATACCGGACCAGAAAAGAGATTCCTCCTGTCT
CATACTAATCAAACCACCAAATGCACAAAACAAAGAAAGAATTTTAAAAG
CAGTAAGGGAAAAAGGTCAAGTAACATATAAAGGCAGACCTATCAGAATT
ATGCCAGACTTCTCACAAGAGACTATGGAATCTAGATCCTGGGTAGATGA
TATACAGACCTTAAGAGAATACAAATGCCAGCCCAGGCTACTATATCCAG
CAAAACTCTCAATTACCAAAGATGGAGAAAACAAGATATTCCATCACAAA
AACAAATTTACACAATATCTTTCCACAAATCCAGCTTTACAAATGATAAT
AGATGGATAAAACAAATACAAGGAGGAAAAGTACACCCTAGAAAAAGCAA
GAAAATAATCTTTCAACAAAACCAAAAGAAGACAGAGAAATAAACATAAT
TCCACCTCTAACAACAAAAATCACAAGAAGTAACAATCACTTTTCCTTAT
TATCTCTTAACATCAATGGACTCAATTCCCCATATAAACAGACTGGATAC
ATAAACAGGACCCTGCATTTTGCTATATACAGGAAAGGCACCTCAGTGAC
AAAGACAAACACTTCTTCAGAGTAAAAGGTTGGAAAACAATTTTCCAAGA
AAATGGTCCCAAGCAACAAGCTGGA

TGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATTATCCAGCGGTCAGTGGCACTTAATTT
TCAGTGTGAGTCTTACTTCCTACCAGTTTCCATAAATTAATACTACTTCT
GTATTTTGGGTAGGTTTTGATGTTTGCTGAGTGATTTTTTTAAAAAAAAA
AGGCCAAGTTGTTTTCTTTGCCTTTTAAGTATACAAGCTTAAAAAAGTTC
ATTATTTTCAATTTAAAGTAACTGCAGCCTAATTGAAAAATTCAGCTCAA
ATTCTGGGGACCTTGTGCTTGCTGACTCTAAAATGTGGATTGAAATCAGA
TTCCAGTTGGGTTTAAGAAGTAACCAGACTAATTTTCAAGACAGGCAATG
AACAGGTAATAATAGCTAAGGAGAAAACACTGCTGTGGAACAGGGGCAGT
GAGATTACTCGGTTTGCCAAACGCTGCAAGTGTGGTTCTTTGTCGGGTTA
ATACAGTATCCTGATTTCCAAAGGTACCAGCCACGGGATGTTGGGGGCAA
CACTAGAGTCTCTGGATTTTGACTACTTCTAAACAAGATTGACCACTGCC
TCTTTTCCCAGTGAACCTAAGTCACTTCAAAGCTGTGGCATCTTTCCTTT
TACACCCTGGGGACCAAAAGGCGCTATGTACCATGAAGCCAAGAGGTGTC
TTGAAACTCCCTAAGTATGGATCTTTTGTAAAGCTATGTCGTGTACCTGC
CATCAGA

Query= MSMg01no260_h09.g1 MSMg01no260_h09.g1 CHROMAT_FILE:
MSMg01no260_h09.g1 PHD_FILE: MSMg01no260_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:34 2005
         (557 letters)



>mm_chr15_6135892_6136849
          Length = 958

 Score =  975 bits (504), Expect = 0.0
 Identities = 545/572 (95%), Gaps = 23/572 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   attatccagcggtcagtggcacttaattttcagtgtgagtcttacttcctaccagtttcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 attatccagcggtcagtggcacttaattttcagtgtgagtcttacttcctaccagtttcc 508

                                                                       
Query: 61  ataaattaatactacttctgtattttgggtaggttttgatgtttgctgagtga------t 114
           |||||||||||||||||||||||||||||||||||||||||||||||||||||      |
Sbjct: 507 ataaattaatactacttctgtattttgggtaggttttgatgtttgctgagtgatattttt 448

                                                                       
Query: 115 ttttttaaaaaaaaaaggccaagttgttttctttgccttttaagtatacaagcttaaaaa 174
           ||||||     ||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 447 tttttt-----aaaaaggccaagttgttttctttgccttttaagcatacaagctttaaaa 393

                                                                       
Query: 175 agttcattattttcaatttaaagtaactgcagcctaattgaaaaattcagctcaaattct 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 agttcattattttcaatttaaagtaactgcagcctaattgaaaaattcagctcaaattct 333

                                                                       
Query: 235 ggggaccttgtgcttgctgactctaaaatgtggattgaaatcagattccagttgggttta 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ggggaccttgtgcttgctgactctaaaatgtggattgaaatcagattccagttgggttta 273

                                                                       
Query: 295 agaagtaaccagactaattttcaagacaggcaatgaacaggtaataatagctaaggagaa 354
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 272 agaagtaaccagactaattttcaagacaggcaatgaacaggtaataatagttaaggagaa 213

                                                                       
Query: 355 aacactgctgtg------------gaacaggggcagtgagattactcggtttgccaaacg 402
           ||||||||||||            ||||||||||||||||||||||||||||||||||||
Sbjct: 212 aacactgctgtgaataggaagtaggaacaggggcagtgagattactcggtttgccaaacg 153

                                                                       
Query: 403 ctgcaagtgtggttctttgtcgggttaatacagtatcctgatttccaaaggtaccagcca 462
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 ctgcaagtgtggttctttgtcgggttaatacagtatcctgatttccaaaggtaccagcca 93

                                                                       
Query: 463 cgggatgttgggggcaacactagagtctctggattttgactacttctaaacaagattgac 522
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  cgggatgttgggggcaacactagagtctctggattttgactacttctaaacaagattgac 33

                                           
Query: 523 cactgcctcttttcccagtgaacctaagtcac 554
            |||||||||||||||||||||||||||||||
Sbjct: 32  aactgcctcttttcccagtgaacctaagtcac 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 958
Length adjustment: 10
Effective length of query: 547
Effective length of database: 948
Effective search space:   518556
Effective search space used:   518556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)