Query= MSMg01no261_a09.b1 MSMg01no261_a09.b1 CHROMAT_FILE:
MSMg01no261_a09.b1 PHD_FILE: MSMg01no261_a09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:18 2005
(670 letters)
>mm_chr15_29005261_29006329
Length = 1069
Score = 1151 bits (595), Expect = 0.0
Identities = 649/667 (97%), Gaps = 3/667 (0%)
Strand = Plus / Minus
Query: 5 gaattctctggtatctact-aataaactaaatgcagtattcaagtatattcaggtcatga 63
||||||||||||||| | | |||||||||||||||||||||||||||| |||||||||||
Sbjct: 869 gaattctctggtatcga-tgaataaactaaatgcagtattcaagtatagtcaggtcatga 811
Query: 64 tactgattcttactggaagagaatttcatgaggaaccacccggagtacatttgtatgtat 123
|| |||||||||||||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 810 tagtgattcttactggaagagaatttcatgaagaaccatcctgagtacatttgtatgtat 751
Query: 124 gtacttatgtatcaagtaagtcttttttcgtcatcaaactcagaattttcagttcgtggt 183
|||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 750 gtacttatttatcaagtaagtctttttttgtcatcaaactcagaattttcagttcatggt 691
Query: 184 gttgctggtagcccatgcctgccctgtgaatattggtgtcctgaatattacatgagctgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gttgctggtagcccatgcctgccctgtgaatattggtgtcctgaatattacatgagctgc 631
Query: 244 agtctttgggttttgcatttcctccatggatgtttctccattggcacagcttttctgccc 303
|||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 630 agtctttgggttgtgcatctcctccatggatgcttctccattggcacagcttttctgccc 571
Query: 304 actgtccttaagatgtagtgtttctactccatatatttcaagtctttatattcattgcat 363
||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |
Sbjct: 570 actgtccttaagatgtagtatttctactccatgtatttcaagtctttatattcattgcgt 511
Query: 364 tctttgctatataattctattttttttcctaaacactgacatgaaagtcatatgatttga 423
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 510 tctttgctatataattctatttttttt-ctaaacactgacatgaaagtcatatgatttga 452
Query: 424 tgggggaaaatgttcctctgagaaacagaatgaagtttgttaatggcacccagcttgata 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tgggggaaaatgttcctctgagaaacagaatgaagtttgttaatggcacccagcttgata 392
Query: 484 tagatagatataaatacagacctttgaagtgcatatagagtacagaatcaagactggatt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tagatagatataaatacagacctttgaagtgcatatagagtacagaatcaagactggatt 332
Query: 544 caaacaaagaagaaattagacaacctctgaaaaatgcagcagagaatggaagccaatgta 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 caaacaaagaagaaattagacaacctctgaaaaatgcagcagagaatggaagccaatgta 272
Query: 604 tcattagctctgagttaattgtttcacagatcagtttgagtgctgatttcatgaatagtt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tcattagctctgagttaattgtttcacagatcagtttgagtgctgatttcatgaatagtt 212
Query: 664 ttcagag 670
|||||||
Sbjct: 211 ttcagag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1069
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1059
Effective search space: 698940
Effective search space used: 698940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no261_a09.g1 MSMg01no261_a09.g1 CHROMAT_FILE:
MSMg01no261_a09.g1 PHD_FILE: MSMg01no261_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:19 2005
(641 letters)
>mm_chr15_28851179_28852222
Length = 1044
Score = 1120 bits (579), Expect = 0.0
Identities = 628/645 (97%), Gaps = 5/645 (0%)
Strand = Plus / Plus
Query: 1 aatagctttgaatggttctgaagccattcacaaatcccaaagatactgagagctgaatat 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatagctttgaatggtactgaagccattcacaaatcccaaagatactgagagctgaatat 260
Query: 61 taattaggcacattctactcggaaatacaagtggtgatttattaaataatttgcaatttg 120
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 taattaggcacattctacttggaaatacaagtggtgatttattaaataattttcaatttg 320
Query: 121 atttctcattgaaatctgtaaattgaacataaacaattaaggattgaagtcagtataatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttctcattgaaatctgtaaattgaacataaacaattaaggattgaagtcagtataatt 380
Query: 181 tgtggccttttcaataaaaa-ttcttaaatttcagtttagatttttatttatagtataca 239
|||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||
Sbjct: 381 tgtggccttttcaataaaaaattcttaaatttcagtttagatttttatttatactagaca 440
Query: 240 tatattctgagtagtacttactatgcaaagaatttgatgtattttcatggccagtactt- 298
||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 441 tatattctgagtagtacttactatgcaaagaatttgatgtattttcatggccatta-ttc 499
Query: 299 aagttacaaagttattctaaaatttcctgattcaatgaatgctaagatgatgaaataatt 358
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 500 aagttacaaagttattcaaaaatttcctgatccaatgaatgctaagatgatgaaataatt 559
Query: 359 catgtagttagataatttgaaaaattataaggtggccctatggctctgagattaaaagtc 418
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 560 catgtagttagataatttgaaaaattataaggttgccctatggctctgagattaaaagtc 619
Query: 419 aatcagaggtttgcaattattgagaaaatgttattaactttcctttcatgggcattaagt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aatcagaggtttgcaattattgagaaaatgttattaactttcctttcatgggcattaagt 679
Query: 479 atggaaaacaattcatatacttttcatatagctcatctatatttacatttattctcatgt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atggaaaacaattcatatacttttcatatagctcatctatatttacatttattctcatgt 739
Query: 539 attatctatgatttttggactgaatatatgaaacacagaagctaggcaatttaaaaatat 598
|||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 attatcaatgacttttggactgaatatatgaaacacagaagctaggcaatttaaaaatac 799
Query: 599 atactat--gtgctttacaaagttctgattatgcccttgttcttt 641
||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 800 atactatctgtgctttacaaagttctgattatgcccttgttcttt 844
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1044
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1034
Effective search space: 652454
Effective search space used: 652454
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
