NNCTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAAATACG
CGGAATTCATCATAGTAATTTCCGTGGTTGATGAGTAAGAAGTGTCCTTC
ATTGTATGTGTGTGTGTGTGTGTGTGTGTGTGAACTTTAGGTTGAAAGTC
TAACAGATTTTATTCAATGTTAGAATGGCTTCTCAAGCTTGTTTCTTATA
ACAATTTGCTTGTAAAATTTTTTTCCAGCCTTTTCCTCTAAGGTAGTGCC
TCTCTTTGTTTGTAAGGTATGCAGCTAAAAGTTAGGTCCTGTTTATGTAA
CCAGTCTGTCAGTCTATGTCTTTTTATTGGTGAATTGAATCCATTAATAT
TAACAGTTAATAATGAAAAGTCATTGCTGCTTCCTATTATTTTGGTTGTT
AGAATTGAAATTCTGTTTACATGGCTATCTTCTTTAGGCTTGTTGAAAGA
TTACTTTCTTGCTTTTTCTCGAACTTTGTTTCCCTCTTTGTGTTTGAGTT
TTCTGTTTATTATCCTTGAACGTCTGGATTTGTGGAAAGATATTGTGTAA
ATTTGTTTTTATCATGGAACGCCTTGATTTCTCCATCTATGGTAATTCAG
AGTTTTGCTGGGTATAGTAGCCTGGGCTGGCATTAGTGTTCTCTTAATGT
CTATATAACATCTGTCCAGGATCTTCTGTCATTCATAGTCTCTGGTGAGA
AGTCTGTTGT

NTTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXACGGTTCCTTTAACCCAGGAAT
AAAGAATTGTAGAAAGTCTGTGATATAGTATAGTGATAAAACTGATATAC
CTTGGTCCTAGTGAAAGGTTTATGTTTTCAACTCAATTAAAAGCATATTG
TAGCATACATAATAATTCACCAAGTATATGAGTCTGAACTCCTTTAAAGG
AGCTTAAATTTAACCTTTCCTATGAAGCTCCCTCAAGTACAGAGCTTTAG
GAAACTGTTAATGACCTCCAGAGATGGTTTAAACTCTAAATGGATCATTC
CCGTTACATCACAATCTATAGTCAAACTTACTGACATTTACTTATAGAAT
TGCATTTAAGAAATAAATCACACTCAAAAATAAAACTTATACCCCTATGG
CTGTTATTACATTTATTTCGTTTTACTTTAACTTTGTAAACTATATTTTA
TAATATTCTCACACAGTGGTATAAGAGTAACATAAGGTATGTTACGCCTG
TAACAATGATATTAATTCTTATACAATATTTTATCCAATTATGTCTATTT
AAAGCACACGAAATGTGGGACTGGGAAAGACAGTCTGTGTTCTGGTTGAG
CAAGGCTTACTCCAAAGACACAGTAGAAACGCTACAAGGGACTGAACAGT
GAGCCATGTT

Query= MSMg01no261_f24.g1 MSMg01no261_f24.g1 CHROMAT_FILE:
MSMg01no261_f24.g1 PHD_FILE: MSMg01no261_f24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:45 2005
         (545 letters)



>mm_chr15_49285477_49286421
          Length = 945

 Score = 1031 bits (533), Expect = 0.0
 Identities = 542/545 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   acggttcctttaacccaggaataaagaattgtagaaagtctgtgatatagtatagtgata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acggttcctttaacccaggaataaagaattgtagaaagtctgtgatatagtatagtgata 260

                                                                       
Query: 61  aaactgatataccttggtcctagtgaaaggtttatgttttcaactcaattaaaagcatat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaactgatataccttggtcctagtgaaaggtttatgttttcaactcaattaaaagcatat 320

                                                                       
Query: 121 tgtagcatacataataattcaccaagtatatgagtctgaactcctttaaaggagcttaaa 180
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtagcacacataataattcaccaagtatatgagtctgaactcctttaaaggagcttaaa 380

                                                                       
Query: 181 tttaacctttcctatgaagctccctcaagtacagagctttaggaaactgttaatgacctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttaacctttcctatgaagctccctcaagtacagagctttaggaaactgttaatgacctc 440

                                                                       
Query: 241 cagagatggtttaaactctaaatggatcattcccgttacatcacaatctatagtcaaact 300
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagagatggcttaaactctaaatggatcattcccgttacatcacaatctatagtcaaact 500

                                                                       
Query: 301 tactgacatttacttatagaattgcatttaagaaataaatcacactcaaaaataaaactt 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tactgaaatttacttatagaattgcatttaagaaataaatcacactcaaaaataaaactt 560

                                                                       
Query: 361 atacccctatggctgttattacatttatttcgttttactttaactttgtaaactatattt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atacccctatggctgttattacatttatttcgttttactttaactttgtaaactatattt 620

                                                                       
Query: 421 tataatattctcacacagtggtataagagtaacataaggtatgttacgcctgtaacaatg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tataatattctcacacagtggtataagagtaacataaggtatgttacgcctgtaacaatg 680

                                                                       
Query: 481 atattaattcttatacaatattttatccaattatgtctatttaaagcacacgaaatgtgg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atattaattcttatacaatattttatccaattatgtctatttaaagcacacgaaatgtgg 740

                
Query: 541 gactg 545
           |||||
Sbjct: 741 gactg 745


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space:   500225
Effective search space used:   500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)