Query= MSMg01no262_a22.b1 MSMg01no262_a22.b1 CHROMAT_FILE:
MSMg01no262_a22.b1 PHD_FILE: MSMg01no262_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:36 2005
(242 letters)
>mm_chr15_67886175_67886816
Length = 642
Score = 387 bits (200), Expect = e-112
Identities = 227/239 (94%), Gaps = 5/239 (2%)
Strand = Plus / Plus
Query: 4 ggaattccacagtgtatgccctgtcttcaattctgcatcctactacattgcacaccacat 63
|||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 204 ggaattccacagtgtaagtcctgtcttcaattctgcatcctactacattgcacactacat 263
Query: 64 tgcacagtccttcttgacctcggtaatctttttttttttttttttggnttttcgagacag 123
||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||
Sbjct: 264 tgcacagtccttcttgacctcagtaatc-----ttttttttttttggtttttcgagacag 318
Query: 124 ggtttctctgtatagccctggctgtcctggaactcactttgtagaccaggctggcctcga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ggtttctctgtatagccctggctgtcctggaactcactttgtagaccaggctggcctcga 378
Query: 184 actcagaaatccgcctgcctctgcctcccaagtgctgggattaaaggcgcgtgccacca 242
||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 379 actcagaaatctgcctgcctctgcctcccaagtgctgggattaaaggcgtgtgccacca 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no262_a22.g1 MSMg01no262_a22.g1 CHROMAT_FILE:
MSMg01no262_a22.g1 PHD_FILE: MSMg01no262_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:36 2005
(294 letters)
>mm_chr15_68056339_68057032
Length = 694
Score = 540 bits (279), Expect = e-158
Identities = 288/291 (98%)
Strand = Plus / Minus
Query: 4 gtgacccacagtgtgcctctcccttcatctgagagcaggatttggcttgaggttaacttc 63
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gtgacccgcagtgtgcctctcccttcatctgagagcaggatttggcttgaggttaacttc 435
Query: 64 catgttaaaccacagttatgtttccattgactgtgcttttctggagtttggcctgctggg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 catgttaaaccacagttatgtttccattgactgtgcttttctggagtttggcctgctggg 375
Query: 124 tgggtctctgcagcagaaagttttgaaatacggaaaaaagaatattgtcattatgcccac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tgggtctctgcagcagaaagttttgaaatacggaaaaaagaatattgtcattatgcccac 315
Query: 184 ctgaggtatctgcaaagggaacagtctgcaggaagtggacaataagatagcccccgcccc 243
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 314 ctgaggtatctgcaaagggaacagtctgcaggaagtggacaataaaatagcccccgcccc 255
Query: 244 ccgtctctctctttctctgttctttgtagtaatcattgtttatgtgtcaga 294
|| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ccatctctctctttctctgttctttgtagtaatcattgtttatgtgtcaga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
