Query= MSMg01no263_a17.b1 MSMg01no263_a17.b1 CHROMAT_FILE:
MSMg01no263_a17.b1 PHD_FILE: MSMg01no263_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:51 2005
(267 letters)
>mm_chr15_80649116_80649781
Length = 666
Score = 455 bits (235), Expect = e-132
Identities = 256/265 (96%), Gaps = 7/265 (2%)
Strand = Plus / Plus
Query: 4 ggaattcggctgattg--cccacaaacaaggaaatggggaagagggtgctgtaactccaa 61
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcggctga--ggccccacaaacaaggaaatggggaagagggtgctgtaactccaa 261
Query: 62 ggtatgctcttcttcccagcctttcttagttggttaaggatatcttaattgattggagaa 121
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggtatgctcttcttccaagcctttcttagttggttaaggatatcttaattgattggagaa 321
Query: 122 aaatcctgttttgtaaaatgggatgtcttagataaaataaggatgtaaatggtgggaact 181
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aa-tcctgttttgtaaaatgggatgtcttagataaaataaggatgtaaatggtgggaact 380
Query: 182 aataagccttctgggtactggtagctttataggtaccatcttcacagcattcatgtaaat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aataagccttctgggtactggtagctttataggtaccatcttcacagcattcatgtaaat 440
Query: 242 actgggggcgggggggggggcttgt 266
||||||||| |||||||| |||||
Sbjct: 441 actgggggcagggggggg--cttgt 463
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 666
Length adjustment: 9
Effective length of query: 258
Effective length of database: 657
Effective search space: 169506
Effective search space used: 169506
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no263_a17.g1 MSMg01no263_a17.g1 CHROMAT_FILE:
MSMg01no263_a17.g1 PHD_FILE: MSMg01no263_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:51 2005
(540 letters)
>mm_chr15_80763083_80764022
Length = 940
Score = 1029 bits (532), Expect = 0.0
Identities = 538/540 (99%)
Strand = Plus / Minus
Query: 1 aacatcacccaaatcaaaaggaaacactccacgtctctgcctcccaggatggggggagta 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 740 aacatcacccaaatcaaaaggaaacactccacatctctgcctcccaggatggggggagta 681
Query: 61 agcagcagatcttcaaaacagcatttaaaacaagcaaacagtagctgggagctaaataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agcagcagatcttcaaaacagcatttaaaacaagcaaacagtagctgggagctaaataaa 621
Query: 121 aaatgaaaagtaaaaccacttgttccttattagactcttctgtttcctcctcctgtaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaatgaaaagtaaaaccacttgttccttattagactcttctgtttcctcctcctgtaaca 561
Query: 181 gatgggaggcgaaacacacacttttcaccaacagaacagtccataggtaattttccttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gatgggaggcgaaacacacacttttcaccaacagaacagtccataggtaattttccttta 501
Query: 241 gtaatgctcatatttaaaattcgtttaaaaaattattaacctatatttcctaactcttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtaatgctcatatttaaaattcgtttaaaaaattattaacctatatttcctaactcttta 441
Query: 301 cagagattctcagcaatccagcaaccgcactgccacagtttacagccgatccttttgctt 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 440 cagagattctcagcaatccagcaaccgcactgccacagtttagagccgatccttttgctt 381
Query: 361 aagctactgtttctttctttattccttgcttttgttgatggggctggagagccagggaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aagctactgtttctttctttattccttgcttttgttgatggggctggagagccagggaga 321
Query: 421 agaagggctgcactggagaacagaaacatgacggggagacgtcagtccagcctcatacag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agaagggctgcactggagaacagaaacatgacggggagacgtcagtccagcctcatacag 261
Query: 481 aaggaacaatgtggtgtcactcctacgagctcaacagtcacccccccagtaagccatgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaggaacaatgtggtgtcactcctacgagctcaacagtcacccccccagtaagccatgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 940
Length adjustment: 10
Effective length of query: 530
Effective length of database: 930
Effective search space: 492900
Effective search space used: 492900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
