Query= MSMg01no265_a09.b1 MSMg01no265_a09.b1 CHROMAT_FILE:
MSMg01no265_a09.b1 PHD_FILE: MSMg01no265_a09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:23 2005
(209 letters)
>mm_chr15_63878615_63879222
Length = 608
Score = 352 bits (182), Expect = e-102
Identities = 202/212 (95%), Gaps = 7/212 (3%)
Strand = Plus / Minus
Query: 1 cctgctggctgcccatctgctgtgaagcctttgcaatggggcttgttca---cgccccag 57
||||||||||||||||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 408 cctgctggctgcccatctgctgtgaagcctttgcaatggggcttggtcatgtgg----ag 353
Query: 58 cctgggaagcaaaggcagcgccaacgtgggcttaatgatgaagtcgctccatctctgagg 117
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 352 cctgggaagcaaaggcagcgccaacgtgggcttaatgatggagtcgctccatctctgagg 293
Query: 118 gtgctgggcacacctgaggcccggctctgctatgtgctccatactctttcattagctgga 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gtgctgggcacacctgaggcccggctctgctatgtgctccatactctttcattagctgga 233
Query: 178 ttaatgtttcttgaggggggtgaggtggagtg 209
||||||||||||||||||||||||||||||||
Sbjct: 232 ttaatgtttcttgaggggggtgaggtggagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 209
Length of database: 608
Length adjustment: 9
Effective length of query: 200
Effective length of database: 599
Effective search space: 119800
Effective search space used: 119800
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no265_a09.g1 MSMg01no265_a09.g1 CHROMAT_FILE:
MSMg01no265_a09.g1 PHD_FILE: MSMg01no265_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:23 2005
(289 letters)
>mm_chr15_63650616_63651305
Length = 690
Score = 368 bits (190), Expect = e-106
Identities = 267/306 (87%), Gaps = 24/306 (7%)
Strand = Plus / Plus
Query: 5 taccctgaaggggaaagcaggccttggaagatgacaaggtctctcccctgcctacacagg 64
||||||||||||||| ||| |||||||||||||||| |||||| | |||||| ||||||
Sbjct: 205 taccctgaaggggaacgcaagccttggaagatgacatggtctcagctctgcctgcacagg 264
Query: 65 tttttctgaggtttctcatgttcgcacaccaggg-tccccccttccttctgttttgaatc 123
||||||||||||||||||||||||||| |||||| |||| |||||| ||||||||||||
Sbjct: 265 tttttctgaggtttctcatgttcgcaccccagggttccctccttccccctgttttgaatc 324
Query: 124 agggtcttaatatattgcccaatcgggacccaaataacctcctatgtctacctcccaggt 183
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 325 agggtgttaatatattgcccaatcgggacccaaatgacctcctatgtctacctcccaggt 384
Query: 184 acctggtgttacagatg--acacagtgtaagcccctatgccgttatcatgggtctgaaat 241
||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 385 acctggtgttacagatgcgacacagtgtaagccc-tatgccattatcatgggtctgaaat 443
Query: 242 --------------------agcacacaatcactggttttgtttgagtttttccggatga 281
|||||||||||| |||||||||||||||||||||||||||
Sbjct: 444 tgttagcatggttctgaaatagcacacaatcaatggttttgtttgagtttttccggatga 503
Query: 282 ttcctg 287
||||||
Sbjct: 504 ttcctg 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 690
Length adjustment: 9
Effective length of query: 280
Effective length of database: 681
Effective search space: 190680
Effective search space used: 190680
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
