Query= MSMg01no270_j16.b1 MSMg01no270_j16.b1 CHROMAT_FILE:
MSMg01no270_j16.b1 PHD_FILE: MSMg01no270_j16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:18 2005
(628 letters)
>mm_chr15_22067935_22068962
Length = 1028
Score = 746 bits (386), Expect = 0.0
Identities = 392/394 (99%)
Strand = Plus / Minus
Query: 5 gaattctctttgttctcatgtcatatagcttttaggaagaaatgtatttcaaataataca 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gaattctctttgttctcatgtcatatagcttttaggaagaaatgtatttcaaataatact 335
Query: 65 attagagaaaatatgcctggccaaaattttaattcatttctgtggcttttacaatacaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 attagagaaaatatgcctggccaaaattttaattcatttctgtggcttttacaatacaca 275
Query: 125 gaacaaataattataatagtcataagaactgccacatgtatcatcctttctatgctgatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gaacaaataattataatagtcataagaactgccacatgtatcatcctttctatgctgatt 215
Query: 185 tgatcttaactgatgttatctaagtcaggaatcttcccacaggctcatgtttctgaacac 244
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 214 tgatcttaactgatgttatctaagtcagaaatcttcccacaggctcatgtttctgaacac 155
Query: 245 tggctgtcatgttaatggtgctgtttgcaaagttcatagaactttcaagatgtcgttatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 tggctgtcatgttaatggtgctgtttgcaaagttcatagaactttcaagatgtcgttatt 95
Query: 305 tctgggcatagtcttccctagaagcagattttgggggttctttgccaggctccattttct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 tctgggcatagtcttccctagaagcagattttgggggttctttgccaggctccattttct 35
Query: 365 cttctcactctctcctttttgcagatgaaatgtc 398
||||||||||||||||||||||||||||||||||
Sbjct: 34 cttctcactctctcctttttgcagatgaaatgtc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no270_j16.g1 MSMg01no270_j16.g1 CHROMAT_FILE:
MSMg01no270_j16.g1 PHD_FILE: MSMg01no270_j16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:18 2005
(670 letters)
>mm_chr15_22034255_22035323
Length = 1069
Score = 1147 bits (593), Expect = 0.0
Identities = 652/673 (96%), Gaps = 7/673 (1%)
Strand = Plus / Plus
Query: 1 agagccctacaaaaccacaaattacagctctttgctctataaacctaatcttgt--acag 58
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 agagccctacaaaaccacaaattacagctctttgctctataaacctaatcttgtacacag 260
Query: 59 agttcataaatatgtgtccagaaaacatataatatgtgtaaatgtaaacacaattacatg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttcataaatatgtgtccagaaaacatataatatgtgtaaatgtaaacacaattacatg 320
Query: 119 attaacttaaaccacaaaggaaaaggatggcatgagggaaaaatagaaaatcaaatcata 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attaacttaaaccacaaaggaaaaggatggcatgagggaaaaatagaaaatcaaatcata 380
Query: 179 actatagagacagtctctgagacagggggagtcagcacacatctggaagcattcagtgtc 238
|| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 accatagagacagtctctgagaca-ggggagtcagcacacatctggaagcattcagtgtc 439
Query: 239 tcatgtgaccatctactttgttctcccagcaatcacaatcttatgtgaatcctgtctcat 298
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcatgtgaccctcttctttgttctcccagcaatcacaatcttatgtgaatcctgtctcat 499
Query: 299 cagtgacttgccactagagattgacactttgtgaataagcatggacatgatgatcttaga 358
|||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||
Sbjct: 500 cagtgacttgccactagacaatgacactttgtgaataagcatggacatgatgctcttaga 559
Query: 359 ctccctaagatctactctacatacaaaatttgaagaaataacatatctggttagagcagt 418
|||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| ||
Sbjct: 560 ctccctaagacctactctacatacaaaacttgaagaaataac--atctggttagagcggt 617
Query: 419 aaggaatgaaacttaacaataactagtgctgaagattaaatttgcaaggatcaagatctt 478
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aaggaatgaaacttaacaataactagtgctgaagattaaatttgcaaggatcaagatctc 677
Query: 479 gtgaacaattgatgcataagagaaccatctggagaaattaatcatatccaggtcccagtt 538
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 678 gtgaacaattgatgcataagagaaccatctggagaaatgaatcatatccaggttccagtt 737
Query: 539 caacagcaagcataattctatcgctgcctcctgaaaaactgtcttgaaccattggaatga 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 caacagcaagcataattctatcgctgcctcctgaaaaactgtcttgaaccattggaatga 797
Query: 599 tacacagacataaaacctgcagttgattagag-aaaaaaaaagggggaattatcactgca 657
|||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| ||
Sbjct: 798 tacacagacataaaacctgcagttgattagaggaaaaaaaaaggtg-aattatcactaca 856
Query: 658 atctatctagaat 670
|||||||||||||
Sbjct: 857 atctatctagaat 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1069
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1059
Effective search space: 698940
Effective search space used: 698940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
