Query= MSMg01no270_o12.b1 MSMg01no270_o12.b1 CHROMAT_FILE:
MSMg01no270_o12.b1 PHD_FILE: MSMg01no270_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:40 2005
(621 letters)
>mm_chr15_49701892_49702912
Length = 1021
Score = 1108 bits (573), Expect = 0.0
Identities = 606/617 (98%)
Strand = Plus / Minus
Query: 5 gaattctgtagctctcagccatgtggcttctttaaagtgatgtctataaacattgcatta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 gaattctgtagctctcagccatgtggcttctttaaagtgatgtctataaacattgcatta 762
Query: 65 tatgagtagagtgataagattcaagtaagcctcaaatcagaaatagaaggcttgactttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tatgagtagagtgataagattcaagtaagcctcaaatcagaaatagaaggcttgactttg 702
Query: 125 ctcacacaaattttcatgctcagggactggcttgtgtcatttttgttcatttgtttctgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ctcacacaaattttcatgctcagggactggcttgtgtcatttttgttcatttgtttctgt 642
Query: 185 ctgatttagtgatctgatcctagttcaaaaatattttaccatgtatataatatgtaaagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ctgatttagtgatctgatcctagttcaaaaatattttaccatgtatataatatgtaaagg 582
Query: 245 tgcttacatttggaacaccgtgaagatttaatgttccaatcatattgcattataaataaa 304
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tgcttacatttggaacactgtgaagatttaatgttccaatcatattgcattataaataaa 522
Query: 305 acaatttctatgagtgagttttgcttatatgcttattactttatctataatatgtcagaa 364
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 acaatttctatgagcaagttttgcttatatgcttattactttatctataatatgtcagaa 462
Query: 365 cagggtctgggatttcttctgtcttatactggtaatgtagtatggttttacctcatctac 424
|||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 461 cagggtctgggatttcgtctgtcttatactggtaatgtagtatgggtttacctcatctac 402
Query: 425 atggagtagcactcagctaagaaagcagtttgtatgcttaaataattacaaatagctcag 484
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 atggagtagcactcagctaggaaagcagtttgtatgcttaaataattacaaatagctcag 342
Query: 485 tgtagtgagtagtgtatctagtcaacttccttgtatgtagaagcaatgggacattaataa 544
|||||||||||||||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 341 tgtagtgagtagtgtatctagtcaacttccttgtatataaaaacaatgggacattaataa 282
Query: 545 agtatacttctgtgagggtattttaagagagagttatctaagtgggaatgtcctttttga 604
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 281 agtaaacttctgtgagggtattttaagagagagttatctaaatgggaatgtcctttttga 222
Query: 605 tagttatctcaacttgg 621
|||||||||||||||||
Sbjct: 221 tagttatctcaacttgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no270_o12.g1 MSMg01no270_o12.g1 CHROMAT_FILE:
MSMg01no270_o12.g1 PHD_FILE: MSMg01no270_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:40 2005
(363 letters)
>mm_chr15_49520181_49520942
Length = 762
Score = 656 bits (339), Expect = 0.0
Identities = 357/363 (98%), Gaps = 1/363 (0%)
Strand = Plus / Plus
Query: 1 atatatatatatatatatcactctttaactttttatcttccaattgaaacaggaaaaaat 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 atatatatatatatatatcactctttaactttttatcttccaattgaagcaggaaaaaat 260
Query: 61 gacttcatgggtatcatgaaaaaaaatgttacaattaactcagttagtttgctgaattca 120
|||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 261 gacttcatgggtgtcatgaaaaaaa-tgttacaattaactcagttagtttgctgaagtca 319
Query: 121 gaattctaattttgccatgatatattcagtatatttaggtatttagttatttaattatta 180
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggattctaattgtgccatgatatattcagtatatttaggtatttagttatttaattatta 379
Query: 181 ggttggagtcaatttttctgagaagtgatttacataacaaagaatcttgaggtctcacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggttggagtcaatttttctgagaagtgatttacataacaaagaatcttgaggtctcacaa 439
Query: 241 ggcagaaattgtgttgtgttgaacattctcttcctcaaagaatacatttatctgtatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggcagaaattgtgttgtgttgaacattctcttcctcaaagaatacatttatctgtatgaa 499
Query: 301 attggcaagacagaatcctttttcctctagaaagaactttaaaattcttcaagatcagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 attggcaagacagaatcctttttcctctagaaagaactttaaaattcttcaagatcagtt 559
Query: 361 tac 363
|||
Sbjct: 560 tac 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 762
Length adjustment: 9
Effective length of query: 354
Effective length of database: 753
Effective search space: 266562
Effective search space used: 266562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
