Query= MSMg01no271_d18.b1 MSMg01no271_d18.b1 CHROMAT_FILE:
MSMg01no271_d18.b1 PHD_FILE: MSMg01no271_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:04 2005
(381 letters)
>mm_chr15_51182229_51183009
Length = 781
Score = 706 bits (365), Expect = 0.0
Identities = 377/381 (98%)
Strand = Plus / Minus
Query: 1 caggtaggcacaccttcccacaccacaagaatggtagccatattgctatttctcctatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 caggtaggcacaccttcccacaccacaagaatggtagccatattgctatttctcctatgt 522
Query: 61 gtgatacacccttagtcagacatgcatatcttatcattcattgtggatgccatactacag 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gtgatacacccttagacagacatgcatatcttatcattcattgtggatgccatactacag 462
Query: 121 cttctcttccatcttctttttggctttactagtttctttctcagtgacaattgtgttgtg 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 461 cttctcttccatcttctttttggctttgctagtttctttctcagtgacaattgtgttgtg 402
Query: 181 tgactttttctggtgaggcaaggaaaaacacaaattgatcctagatggggcaataatgaa 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 401 tgactttttctggtgaggcaaggaaaaacacaaattcatcctagatggggcaataatgaa 342
Query: 241 agaatgaagaaacagttccactcctgactagcctagtaagttgggagtttgctgggatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 agaatgaagaaacagttccactcctgactagcctagtaagttgggagtttgctgggatta 282
Query: 301 cttactcgagagtaagcaactcaaaggcagcttcatcaccataagccacccatgtgttat 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 281 cttactcgagagtaagcaactcaaaggcagcttcatcaccacaagccacccatgtgttat 222
Query: 361 tgaggataaagcatccttaga 381
|||||||||||||||||||||
Sbjct: 221 tgaggataaagcatccttaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no271_d18.g1 MSMg01no271_d18.g1 CHROMAT_FILE:
MSMg01no271_d18.g1 PHD_FILE: MSMg01no271_d18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:04 2005
(354 letters)
>mm_chr15_51051770_51052523
Length = 754
Score = 650 bits (336), Expect = 0.0
Identities = 347/354 (98%), Gaps = 6/354 (1%)
Strand = Plus / Plus
Query: 1 ttgaaatatttacctatgtaagataatgagtttttaagaaaaatctaaattagtttgata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgaaatatttacctatgtaagataatgagtttttaagaaaaatctaaattagtttgata 260
Query: 61 atagtttttccccctaatgcatgattcttagaatttacctgatgaagcatacttattttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atagtttttccccctaatgcatgattcttagaatttacctgatgaagcatacttattttc 320
Query: 121 ttttcagtaatgaatctaaatgtaatctacaatagcacataacaaaaacaaaaacaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttcagtaatgaatctaaatgtaatctacaatagcacataacaaaaacaaaaa------ 374
Query: 181 tacccaaaaatcccaaaaacagaatttctgttttgtgagaataggatttctgttccaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tacccaaaaatcccaaaaacagaatttctgttttgtgagaataggatttctgttccaaaa 434
Query: 241 tttaaaaatgaaattaagaacagaggcaattagaggaaaatatgagagttttctaaatat 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tttaaaaatgaaattaaggacagaggcaattagaggaaaatatgagagttttctaaatat 494
Query: 301 tagcagatcatggatgaaaaactgcttccaagtgcacagaatcctgttgtttga 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tagcagatcatggatgaaaaactgcttccaagtgcacagaatcctgttgtttga 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
