Query= MSMg01no272_l04.b1 MSMg01no272_l04.b1 CHROMAT_FILE:
MSMg01no272_l04.b1 PHD_FILE: MSMg01no272_l04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:55 2005
(605 letters)
>mm_chr15_50892229_50893234
Length = 1006
Score = 1087 bits (562), Expect = 0.0
Identities = 592/602 (98%), Gaps = 1/602 (0%)
Strand = Plus / Plus
Query: 5 gaattctctgatttatcc-attgattttatttctcattttcattctttctacattggtgg 63
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctgatttaacatattgattttatttctcattttcattctttctacattggtgg 264
Query: 64 ttcttttctccccactgatcatagcttttagtttttcttcatactcctaagagaaagaag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcttttctccccactgatcatagcttttagtttttcttcatactcctaagagaaagaag 324
Query: 124 agaagcgaatagtttattctatgtttcaaagaatttttcatgggacttttagataaacaa 183
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 325 agaagcaaatagtttattctatgtttcaaagaatttttcatgggatttttagataaacaa 384
Query: 184 aagctaggaaacattttaacatctggggtattttttcccttcaacatatatatcctctca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagctaggaaacattttaacatctggggtattttttcccttcaacatatatatcctctca 444
Query: 244 tgcttcttcctcttactgactttcctagaattttaaagttctttgtatagaaaagaggca 303
|||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 445 tgcttcttcctcctaccgactttcctagaattttaaagttctttgtatagaaaagatgca 504
Query: 304 ggctaactacccagtatagaaaacagaactgtatgccagtgacgtatacctgagctttaa 363
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 505 ggctaactacccagtaaagaaaacagaactgtatgccagtgacatatacctgagctttaa 564
Query: 364 gcctcaaagtcagcagataattttgtattggcatgataaccatcccttctccaaggttta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcctcaaagtcagcagataattttgtattggcatgataaccatcccttctccaaggttta 624
Query: 424 aatatgtgtttatggtagtttaaatgctcaaccaggttatctggtaaatgtttacttata 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aatatgtgtttatggtagtttaaatgctcaaccaggttatctggtaaatgtttacttata 684
Query: 484 aggtctttggatagatttagttacttcttcctatctcagaggttcttgtaaaaagcaggc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aggtctttggatagatttagttacttcttcctatctcagaggttcttgtaaaaagcaggc 744
Query: 544 acttagcagtacttaggtagggttttgatgtcttttcataataaacaaggaccaaatgta 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 acttagcagtacttaggtagggttttgatgtcttttcataataaacaaggaccaaatgta 804
Query: 604 aa 605
||
Sbjct: 805 aa 806
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1006
Length adjustment: 10
Effective length of query: 595
Effective length of database: 996
Effective search space: 592620
Effective search space used: 592620
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_l04.g1 MSMg01no272_l04.g1 CHROMAT_FILE:
MSMg01no272_l04.g1 PHD_FILE: MSMg01no272_l04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:55 2005
(291 letters)
>mm_chr15_51051166_51051856
Length = 691
Score = 555 bits (287), Expect = e-162
Identities = 290/291 (99%)
Strand = Plus / Minus
Query: 1 cactgattggatctaggtacatattgtcatagtttaggggtgcttatgtctcctgtttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 cactgattggatctaggtacatattgtcatagtttaggggtgcttatgtctcctgtttca 432
Query: 61 caaaggcattaaaggaagtaaagaggaagatgttcaggaattcctatcatgtccttctgt 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 caaaggcattaaaagaagtaaagaggaagatgttcaggaattcctatcatgtccttctgt 372
Query: 121 cagtcagtcttgggccccacatttggcctttggtgtgttagtaggaacaaaatgcctatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 cagtcagtcttgggccccacatttggcctttggtgtgttagtaggaacaaaatgcctatt 312
Query: 181 cttctacctaaatccaggaagagattttgtgtctgatcttattcctttttgtatttatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cttctacctaaatccaggaagagattttgtgtctgatcttattcctttttgtatttatca 252
Query: 241 cttttctgtttggaagtattaatttttttgtcttttgagccatttctgtca 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cttttctgtttggaagtattaatttttttgtcttttgagccatttctgtca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
