Query= MSMg01no273_h23.b1 MSMg01no273_h23.b1 CHROMAT_FILE:
MSMg01no273_h23.b1 PHD_FILE: MSMg01no273_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:53 2005
(293 letters)
>mm_chr15_47069735_47070427
Length = 693
Score = 476 bits (246), Expect = e-139
Identities = 279/290 (96%), Gaps = 1/290 (0%)
Strand = Plus / Plus
Query: 4 ctggtgcaagggttgtggtgaagggaagagaatgcaggcagggagcgcccgtcacttcct 63
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 204 ctggtgcaagggttgtggtgaagggaagagaatgcaggcagggagcggaagtcacttcct 263
Query: 64 cacttccgctgtgcaggttagcttcacctccatctctgctgtgctataattctgtgccac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cacttccgctgtgcaggttagcttcacctccatctctgctgtgctataattctgtgccac 323
Query: 124 cctgcgctgagtcggttcaggctgggctgacaagctgactatccagtgagaagttaggca 183
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 324 cctgcgctgagtcggttcagactgggctgacaagctgactatccagtgagaagtcaggca 383
Query: 184 gggcctcaggtggcacttcgggagagctgatctcttcccaagtgttacagctcttaggac 243
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 384 gggcctcaggtggcacttcgggagagctgatctctccccaagtgttacagctcttaggac 443
Query: 244 aaaggctcgttattatagagtagttctcaagtacacatttattccctgga 293
||||||||| | | ||||||||||||||||||||||||||||||||||
Sbjct: 444 aaaggctcgg-acaacagagtagttctcaagtacacatttattccctgga 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no273_h23.g1 MSMg01no273_h23.g1 CHROMAT_FILE:
MSMg01no273_h23.g1 PHD_FILE: MSMg01no273_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:53 2005
(214 letters)
>mm_chr15_47214693_47215311
Length = 619
Score = 371 bits (192), Expect = e-107
Identities = 210/218 (96%), Gaps = 5/218 (2%)
Strand = Plus / Minus
Query: 1 ctgggcacggccaggttctgttggctttggaatccagggtttgctgaattggctgc-ccc 59
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 418 ctgggcacggccaggatctgttggctttggaatccagggtttgctgaattggctgctccc 359
Query: 60 ctctaccctcttactaaacaatggacagcctatccattggggcggggggtt----ggggg 115
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 358 ttctaccctcttactaaacaatggacagcctatccattggggcgggggggtggggggggg 299
Query: 116 gagaacaggaacagtcttttgatgcgattaagcaggctttgcttgaagcccctgctctag 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gagaacaggaacagtcttttgatgcgattaagcaggctttgcttgaagcccctgctctag 239
Query: 176 gactgcctgatgccagcagacctttccacctttatgca 213
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gactgcctgatgccagcagacctttccacctttatgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 619
Length adjustment: 9
Effective length of query: 205
Effective length of database: 610
Effective search space: 125050
Effective search space used: 125050
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
