Query= MSMg01no273_i06.b1 MSMg01no273_i06.b1 CHROMAT_FILE:
MSMg01no273_i06.b1 PHD_FILE: MSMg01no273_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:54 2005
(332 letters)
>mm_chr15_18268851_18269582
Length = 732
Score = 613 bits (317), Expect = e-180
Identities = 326/329 (99%)
Strand = Plus / Minus
Query: 4 ggaattcatatataatcatagacatgacaaacctttgtccgatttaatccttagggagaa 63
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 532 ggaattcatatataatcatagacatgacaaacctttgcccgatttaatccttagggagaa 473
Query: 64 aagattttatcattattatcgtaataatgtcttgtgtatcacaagtttctcgtcacaaat 123
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 472 aagattttatcattattatcataataatgtcttgtgtatcacaagtttctcgtcacaaat 413
Query: 124 attgagtgggttacatactttgatattcagatatgtgtcaaatgctgtgcatgctgtttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 attgagtgggttacatactttgatattcagatatgtgtcaaatgctgtgcatgctgtttt 353
Query: 184 gaatgagacttatattgattttatttttatccttggaaacatgtccagtttgttgcatag 243
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gaatgagacttacattgattttatttttatccttggaaacatgtccagtttgttgcatag 293
Query: 244 tttaatattattattcaaatttcaagagatatatggcataattaaatttattttgattgt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tttaatattattattcaaatttcaagagatatatggcataattaaatttattttgattgt 233
Query: 304 gagattatgttctgaaaataattacctaa 332
|||||||||||||||||||||||||||||
Sbjct: 232 gagattatgttctgaaaataattacctaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_i06.g1 MSMg01no273_i06.g1 CHROMAT_FILE:
MSMg01no273_i06.g1 PHD_FILE: MSMg01no273_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:54 2005
(293 letters)
>mm_chr15_18152141_18152832
Length = 692
Score = 499 bits (258), Expect = e-146
Identities = 276/282 (97%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 2 taattttgaattttttctgtgaaataaatgttgaaatattttaagaatttacccaattga 61
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 taattttgaattttt-ctgtgaaataaatgttgaaatattttaagaatttacccaattgc 260
Query: 62 ttcaaagcaagtgattttcttttatttacttatttaatgatttattcaaataagaatgtg 121
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 ttcaaagcaagtgattttcttttatttacttatttaatgatttactcaaataagaatgtg 320
Query: 122 agaatagatttgaaaggagttatgcaatggtgttatttttccagaaaataagagtgaatc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaatagatttgaaaggagttatgcaatggtgttatttttccagaaaataagagtgaatc 380
Query: 182 acaaaagctccttaagttgcagcttaaagctaaagaggtagatcattttgtcttctttaa 241
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 acaaaagctcgttaagttgcagcttaaagctaaagaggtagatcattttgtcttcattaa 440
Query: 242 gttctattgttcatcagtccaatgtaatggaggaacaaggca 283
|||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 gttctattgttcatcagtccaacgtaatggaggaacaaggca 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 692
Length adjustment: 9
Effective length of query: 284
Effective length of database: 683
Effective search space: 193972
Effective search space used: 193972
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
