Query= MSMg01no273_j04.b1 MSMg01no273_j04.b1 CHROMAT_FILE:
MSMg01no273_j04.b1 PHD_FILE: MSMg01no273_j04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:58 2005
(585 letters)
>mm_chr15_62138076_62139060
Length = 985
Score = 1042 bits (539), Expect = 0.0
Identities = 571/582 (98%)
Strand = Plus / Plus
Query: 4 ggaattctcactacattttggtccttgaataaagatgagacaaagtaaaggagcaggcct 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcactacaaaatggtccttgaataaagatgagacaaagtaaaggagcaggcct 263
Query: 64 ggtagacatttgaggatacgacctgtctggtgaaggaaagaatgtgcttagaaattgtaa 123
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggtagacatttgaggataggacctgtctggtgaaggaaagaatgtgcttagaaattgtaa 323
Query: 124 aaatagagtcagtgtatacattgataacctgggacatgtgcggagccagtgctggggact 183
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaatagagtgagtgtatacattgataacctgggacatgtgcggagccagtgctggggact 383
Query: 184 ctctggtcattgcaatgcacaagcatagagaggaatctgagatgtgtgggcaactacacc 243
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 384 ctctggtcattgcaatgcacaagcatagagaggaatatgagatgtgtgggcaactacacc 443
Query: 244 acctccctcccagaaagagctcaaactagaagatgtgatttatcccaggtgatgccagaa 303
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acttccctcccagaaagagctcaaactagaagatgtgatttatcccaggtgatgccagaa 503
Query: 304 attgtaacaatatatctctatattattactaggggccaatttcagtctcctagtaggcat 363
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 504 attgtaacaatatatctctagattattactaggggccaatttcagtctcctagtaggcat 563
Query: 364 gtagaataatgaatgcaatgctaaggcatcagctatgaagataaaggaaaagtactgatt 423
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 564 gtagaataatgaatgcaatgctaaggcatcagctatggagataaaggaaaagtactgatt 623
Query: 424 aattcattaggtatcttctaggaacttctgttctgtagtcatgcatgcaagagtgaatct 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aattcattaggtatcttctaggaacttctgttctgtagtcatgcatgcaagagtgaatct 683
Query: 484 tanaatttgatccattatctaaatagcattcatacatttcaattggttgctatctgttag 543
|| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 684 taaaatttgatccattatctaaatagcattcatacatttcaattggctgctatctgttag 743
Query: 544 acttctttgactcacaagtcctctattagcttgctagagtca 585
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 acttctttgactcacaagtcctctattagcttgctagagtca 785
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_j04.g1 MSMg01no273_j04.g1 CHROMAT_FILE:
MSMg01no273_j04.g1 PHD_FILE: MSMg01no273_j04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:58 2005
(296 letters)
>mm_chr15_62281849_62282546
Length = 698
Score = 514 bits (266), Expect = e-150
Identities = 290/298 (97%), Gaps = 2/298 (0%)
Strand = Plus / Minus
Query: 1 agcagagtttgactcaggtgatg-aaacctagttggtatgtgaactgaaaataacgttaa 59
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 498 agcacagtttgactcaggtgatgaaaacctagttggtatgtgaactgaaaataacattaa 439
Query: 60 cactgtacaaatgctttaatatgaggatcttgaagaataaatacggaatatggatgacag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cactgtacaaatgctttaatatgaggatcttgaagaataaatacggaatatggatgacag 379
Query: 120 agaaaactcatccttatctcgggaagatgaaaagctggacaaatactttttttttttttg 179
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 378 agaaaactcatccttatctcgggaagatggaaagctggacaaattctttttttttttttt 319
Query: 180 -ggcccagccccaaactggacaaattctaagaacatcttcactgtgcaagagaaaggctg 238
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tggaccagccccaaactggacaaattctaagaacatcttcactgtgcaagagaaaggctg 259
Query: 239 ttcaccgtgggatcagatgtctcagactgaaacccaattgtatcctaaaagacggaaa 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ttcaccgtgggatcagatgtctcagactgaaacccaattgtatcctaaaagacggaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 698
Length adjustment: 9
Effective length of query: 287
Effective length of database: 689
Effective search space: 197743
Effective search space used: 197743
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
