Query= MSMg01no273_m22.b1 MSMg01no273_m22.b1 CHROMAT_FILE:
MSMg01no273_m22.b1 PHD_FILE: MSMg01no273_m22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:15 2005
(323 letters)
>mm_chr15_42343389_42344111
Length = 723
Score = 592 bits (306), Expect = e-173
Identities = 315/318 (99%)
Strand = Plus / Minus
Query: 5 gaattcattatcaacatacaagctagagaagcaacttctccaacagacaaatgaaattct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gaattcattatcaacatacaagctagagaagcaacttctccaacagacaaatgaaattct 463
Query: 65 gaagattcacgaaaaaaacaggtaaggactattttattatgaaaatgcttttatgtatac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gaagattcacgaaaaaaacaggtaaggactattttattatgaaaatgcttttatgtatac 403
Query: 125 ctctcgaaatcctttatctcaccggcaactgaaagtttcttttgaggtaactgaaaaact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ctctcgaaatcctttatctcaccggcaactgaaagtttcttttgaggtaactgaaaaact 343
Query: 185 atatccacaagagaagagaaagatgcaggtacagccaatgtgtcaaccactgggcctgcg 244
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 342 atatccacaagagaagagaaagatgcaggtacagccaatgtgtcaaccattgggcctgtg 283
Query: 245 ttctgattccatctggagttgcttagccctcagtcttaacttctgccacgggccattttt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ttctgattccatctggagttgcttagccctcagtcttaacttctgccacgggccattttt 223
Query: 305 ctaatagcaccatatata 322
||||||| ||||||||||
Sbjct: 222 ctaatagtaccatatata 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_m22.g1 MSMg01no273_m22.g1 CHROMAT_FILE:
MSMg01no273_m22.g1 PHD_FILE: MSMg01no273_m22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:15 2005
(294 letters)
>mm_chr15_42305463_42306154
Length = 692
Score = 509 bits (263), Expect = e-148
Identities = 285/293 (97%), Gaps = 4/293 (1%)
Strand = Plus / Plus
Query: 1 tattaggcgtggcagacttctgctacatatgtgacacacaggagggcgggacaacatttc 60
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tattaggcgtgtcagacttctgctacatatgtgacacacaggagggcaggacaacatttc 260
Query: 61 tgatgtaaataaataaaagaagtgtgtaaaaatcatgatggaaaaaaaggagttctctta 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 tgatgtaaataaataaaagaagtgtgtaaaaatcatgatggaaaaaaaagagttctctta 320
Query: 121 gggaaaagaaaaaaaatatatattcctttaaactcctaatgagaacacttttagtttaca 180
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggaaaag--aaaaaatatatattcctttaaactcctaatgagaacacttttagtttaca 378
Query: 181 caacgaaaa-gtctggaaaaccctattgtaatgaggtggctggctcttacattgaattcc 239
|||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 379 caac-aaaatgtctggaaaaccctattataatgaggtggctggctcttacattgaattcc 437
Query: 240 tcaagagagagtgtgtgtagacttattttaggatatccaaatgcccctcccta 292
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tcaagagagagtgtgtgtagacttattttaggatatccaaatgcccctcccta 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 692
Length adjustment: 9
Effective length of query: 285
Effective length of database: 683
Effective search space: 194655
Effective search space used: 194655
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
