Query= MSMg01no274_e22.b1 MSMg01no274_e22.b1 CHROMAT_FILE:
MSMg01no274_e22.b1 PHD_FILE: MSMg01no274_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:49 2005
(236 letters)
>mm_chr15_51180711_51181345
Length = 635
Score = 441 bits (228), Expect = e-128
Identities = 234/236 (99%), Gaps = 1/236 (0%)
Strand = Plus / Minus
Query: 1 actgccagggtgcctgctgtgccctgattggctaagtgcggtattcaaatcaggaaacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 actgccagggtgcctgctgtgccctgattggctaagtgcggtattcaaatcaggaaacta 376
Query: 61 ttgtaaagagtcaatcagaagagaaatgtcaaaatgggtcggtggaaggggtacaggaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttgtaaagagtcaatcagaagagaaatgtcaaaatgggtcggtggaaggggtacaggaga 316
Query: 121 aaaaccctggactggccaaatgctgtcagaagttcacaatcaaatccgatactctgtctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aaaaccctggactggccaaatgctgtcagaagttcacaatcaaatccgatactctgtctc 256
Query: 181 tgtagagcttaagacaccaaaaaagtttctgcttgctcctttcagcctactgcttc 236
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 255 tgtagagcttaagacacc-aaaatgtttctgcttgctcctttcagcctactgcttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 635
Length adjustment: 9
Effective length of query: 227
Effective length of database: 626
Effective search space: 142102
Effective search space used: 142102
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no274_e22.g1 MSMg01no274_e22.g1 CHROMAT_FILE:
MSMg01no274_e22.g1 PHD_FILE: MSMg01no274_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:49 2005
(239 letters)
>mm_chr15_51051515_51052153
Length = 639
Score = 455 bits (235), Expect = e-132
Identities = 238/239 (99%)
Strand = Plus / Plus
Query: 1 agcacaattggcactattatgttacttttaaaaataaaaattgcttcaacctttctaatg 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcacaattggcacaattatgttacttttaaaaataaaaattgcttcaacctttctaatg 260
Query: 61 ctttgtagcatgccatccccacatcgcctggcacatttatgatttctataagaacaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttgtagcatgccatccccacatcgcctggcacatttatgatttctataagaacaaatg 320
Query: 121 cagaaactgtcttgaggattgacacagcccatctgcttcaaatagctgctattgcaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagaaactgtcttgaggattgacacagcccatctgcttcaaatagctgctattgcaaaaa 380
Query: 181 tgccatattttctcctaacattcttttacacaaaagcagactgaaaagagcaggtatta 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgccatattttctcctaacattcttttacacaaaagcagactgaaaagagcaggtatta 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
