Query= MSMg01no275_d14.b1 MSMg01no275_d14.b1 CHROMAT_FILE:
MSMg01no275_d14.b1 PHD_FILE: MSMg01no275_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:55 2005
(229 letters)
>mm_chr15_28141538_28142166
Length = 629
Score = 420 bits (217), Expect = e-122
Identities = 226/229 (98%)
Strand = Plus / Plus
Query: 1 aatgatagagctgaacgaatggcaggtaagctgggagacaacaccaaggtggcagtcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgatagagctgaacgaatggcaggtaagctgggagacaacaccaaggtggcagtcaac 260
Query: 61 aacctagaatataagtactagtctctgcctacagctccctacaacctgtacacagaccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacctagaatataagtactagtctctgcctacagctccctacaacctgtacacagaccct 320
Query: 121 ggtatccttctagaacatcctagaataacccttagctgctaatttaaagaaaacgtctat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 ggtatccttctagaacatcctagaataacccttagctgctaatttaaagaaaacatctat 380
Query: 181 agaatggattcatcattcatcgtctccctcagaactctgctattcaact 229
||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 381 agaatggattcatcagtcatcgtctccctcagaactctactattcaact 429
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no275_d14.g1 MSMg01no275_d14.g1 CHROMAT_FILE:
MSMg01no275_d14.g1 PHD_FILE: MSMg01no275_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:55 2005
(282 letters)
>mm_chr15_28300304_28300985
Length = 682
Score = 501 bits (259), Expect = e-146
Identities = 277/283 (97%), Gaps = 2/283 (0%)
Strand = Plus / Minus
Query: 1 agatgcctgggtaagagtaatcattgccattctggttgccttttatttggcagtagctat 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 agatgcctgggtaagaataatcattgccattctggttgccttttatttggcagtagctat 423
Query: 61 ggctgcagatgcctacata-tcccacagattacacttgggttttcccccaattcctgtga 119
||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||
Sbjct: 422 ggctgcagatgcctacatact-ccacagataacacttgggttttcccccaattcctgtgc 364
Query: 120 tgtgacaatcacatttctatctgcaaacatgaaaacaaggagattcaagagacattcagc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgtgacaatcacatttctatctgcaaacatgaaaacaaggagattcaagagacattcagc 304
Query: 180 caataggtattaaatcctcccttctacctctgatagaccacaagtcctagacatgttctt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 caataggtattaaatcctcccttctacctctgatagaccacaagtcctagacatgttctt 244
Query: 240 ttgctctaccccacatctctgctcagtttaataaccaaagtga 282
|||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 243 ttgctctaccccacatctttgctcagtttaataaccaaagtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
