NNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAAAGAGGATC
CGCGGAATTCCTATATTCCAGGCTCAGATAATATGAAGAGAAGGGGACTG
AATGAATGTAAGAGCCAGAAGAACGGGGTGTATGTCCTGGGAGATATCTA
GCATGCTACACTCATGAAATTTCAACAATATGACCTCCTAAATAAAACCT
GAACAATGACAGCAGTACCTATTATAATACCAACATGGATGACAAAATCT
CATGGGATACTACCCTTAGATAAAGGAATACAGAAAGCCAATGACTGTTA
TATTATATGGATTATAGTCATATGCAAATATTACATAGATGCAGCATGTT
ATATTTGCAGATATATTAACATGTGACTATGTATGCCAAATATGTAACTT
TTTTATATATATTTTCTTTATTTACATTTAAAATGTTATCCCCTTTCCTG
GTTTCCCTACCTCCAGAAACACCCTGTAACATCCTCTCTCCCTCTGCTTC
TATGAGGGTGTTTCTGCACCCACCCACTTACTCCCACCTTCACAGGACCA
AGGACCTCTCCTCCCATTGATGTATGACAAGGCCATCCTCTGCAACACAT
GCAACTAGAGCCATGTATACTCCTTTGTTGATAACTTAATCCCTGAGAGT
TCTGGAGGTCTGGCTCGTTGATATTGTTGTTATTCCTATGGGGTTGCAAA
ACACTTCAACTCTTGTTAGTCCTTTCTTCAACT

NTCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTACATTTCCATCTTAGGT
GATATTCTCTGGAGACAGTATTATGCCTATTTAGTGTATATAAGCACAAA
GTATTTGAGATTTGATTCTCTGGCTTGACTTCTAGACAATCATTAGGTAT
AATTACCATTAATAAAGGTTAAAAAACTGTCTACTAAAGTTTATTATAAC
TATAACAATTGATGTCCGTTCGAGATCTCAAGTTGTTTCATAAATGTTCA
ATCCTTATACATATATTTGTATATCACTGCAAATTGGGTCAGCTAAATTT
TCTGAAATGAAAACATTGGTGGAAAGGCTTTTAATTTATTTGAGGAAGAT
GTAATTTAACATACAAGATACATATTTCATCAAAGAGAAAATCACACCTG
TAGACAAATAGAAAAAGGCGAGACAGTCTGGATTTAAAGAATGTCAAACT
AAGTTTACACACAGGCTAACACGGGTAATTTTGTAAAATATTTATTATTT
TATACAAGATCAGCACATCAGGAAAGAATGACAAGGTAAGATAGTGCTTT
CTTTGTTGCTATCATCCTTTATTGTCAGACTCTTCACTATTGCACATATT
ACCTTACCCTGAGCAAGGTCCATGGAATGTGCACTTTTAGTTATGAAATG
TAACTGAGGTCCTTGATTTTATATGTTTATATAAN

Query= MSMg01no275_f19.g1 MSMg01no275_f19.g1 CHROMAT_FILE:
MSMg01no275_f19.g1 PHD_FILE: MSMg01no275_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:05 2005
         (608 letters)



>mm_chr15_24094855_24095868
          Length = 1014

 Score =  930 bits (481), Expect = 0.0
 Identities = 571/603 (94%), Gaps = 9/603 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tatttagtgtatataagcacaaagtatttgagatttgattctctggcttgacttctagac 60
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 604 tatttagtgtatataagcacaaagtatttgagacttgattctctggcttgacttctagac 545

                                                                       
Query: 61  aatcattaggtataattaccattaataaaggtta--aaa---aactgtctactaaagttt 115
           |||||||||||||||||||||||| |||||||||  |||   |||  |||||||||| ||
Sbjct: 544 aatcattaggtataattaccattactaaaggttaagaaaggtaaccatctactaaaggtt 485

                                                                       
Query: 116 attataactataacaattgatgtccgttcgagatctcaagttgtttcataaatgttcaat 175
           ||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 484 attataactgtaacaattgatgtccgttcaaggtctcaagttgtttcataaatgttcaat 425

                                                                       
Query: 176 ccttatacatatatttgtatatcactgcaaattgggtcagctaaattttctgaaatgaaa 235
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 424 ccttatacatatatttgtatatcactgcaaattgagtcagctaaattttctgaaatgaaa 365

                                                                       
Query: 236 acattggtggaaaggcttttaatttatttgaggaagatgtaatttaacat-acaagat-a 293
           ||||||||||||||  |||||||||||||||||||||||||||| ||| | | ||||| |
Sbjct: 364 acattggtggaaagttttttaatttatttgaggaagatgtaattcaacttga-aagataa 306

                                                                       
Query: 294 catatttcatcaaagagaaaatcacacctgtagacaaatagaaaaaggcgagacagtctg 353
           ||||||||||||||||| |||||||||||||||||||||||| ||||| |||| ||||||
Sbjct: 305 catatttcatcaaagaggaaatcacacctgtagacaaatagagaaaggggagaaagtctg 246

                                                                       
Query: 354 gatttaaagaatgtcaaactaagtttacacacaggctaacacgggtaattttgtaaaata 413
           ||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||| 
Sbjct: 245 gatataaagaatgccaaagtaagtttacacacaggctaacacgggtaattttgtaaaatg 186

                                                                       
Query: 414 tttattattttatacaagatcagcacatcaggaaagaatgacaaggtaagatagtgcttt 473
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tttattattttataccagatcagcacatcaggaaagaatgacaaggtaagatagtgcttt 126

                                                                       
Query: 474 ctttgttgctatcatcctttattgtcagactcttcactattgcacatattaccttaccct 533
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ctttgttgctatcatcctttattgtcagactcttcactattgcacatattaccttaccct 66

                                                                       
Query: 534 gagcaaggtccatggaatgtgcact-tttagttatgaaatgtaactgaggtccttgattt 592
           ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 65  gagcaaggtccatggaatgtgcactgtttagttatgaaatgtgactgaggtccttgattt 6

              
Query: 593 tat 595
           |||
Sbjct: 5   tat 3


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1014
Length adjustment: 10
Effective length of query: 598
Effective length of database: 1004
Effective search space:   600392
Effective search space used:   600392
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)