Query= MSMg01no276_a15.b1 MSMg01no276_a15.b1 CHROMAT_FILE:
MSMg01no276_a15.b1 PHD_FILE: MSMg01no276_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:53 2005
(341 letters)
>mm_chr15_28310461_28311201
Length = 741
Score = 652 bits (337), Expect = 0.0
Identities = 340/341 (99%)
Strand = Plus / Plus
Query: 1 actggaagatttgattcatacttttgttaccaacatttgcctaaaaacttcttgttttca 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 actggaagatttgattcatacttttgttaccaacatttgcctaaaaccttcttgttttca 260
Query: 61 agtcacttttacttatttgagctaattgatttttctaatgaagtctgttaggtggtcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtcacttttacttatttgagctaattgatttttctaatgaagtctgttaggtggtcagg 320
Query: 121 gagcaatagtacatcttgcagctggagttcagaaagcccgtaaattatgtgacatcagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagcaatagtacatcttgcagctggagttcagaaagcccgtaaattatgtgacatcagac 380
Query: 181 agtgcaggggaattgattgcactgcaggatttgtaatcaatccagatgtctagtcaagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtgcaggggaattgattgcactgcaggatttgtaatcaatccagatgtctagtcaagtg 440
Query: 241 tgactcccactacaactgtatggctcagtaaacacccacaacgttcacagtgacaaattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgactcccactacaactgtatggctcagtaaacacccacaacgttcacagtgacaaattt 500
Query: 301 gtccctctacatgtcacactgaaaatgatccattaccaatg 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtccctctacatgtcacactgaaaatgatccattaccaatg 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_a15.g1 MSMg01no276_a15.g1 CHROMAT_FILE:
MSMg01no276_a15.g1 PHD_FILE: MSMg01no276_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:54 2005
(264 letters)
>mm_chr15_28452942_28453606
Length = 665
Score = 466 bits (241), Expect = e-136
Identities = 259/265 (97%), Gaps = 1/265 (0%)
Strand = Plus / Minus
Query: 1 agtagattgagtacatcctagaaatgatgttcctctagggagacttgtctcaagaaaaca 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 333 agtagattgagtacatcctagaaatgatgttcctctagggagacttgtttcaagaaaaca 274
Query: 61 tctggttgtctatatttccttgaaaaaaa-ctttggggccaatgcaagatagataggctg 119
||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 273 tctggttatctatatttccttgaaaaaaacctttggggccaatgcaagatagataggctg 214
Query: 120 ttttaaaattaattctgtgtccattcagagatgatgcaccttgccctcaagagaatggag 179
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 213 ttttaaaattaattctgtgtccattgagagatgatgcaccttgccctcaagagaatggag 154
Query: 180 gtcccagggaggctagaggtcaggtggggtggggggtggggacatccacgtggagacagg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 gtcccagggaggctagaggtcaggtggggtggggggtggggacatccacgtggagacagg 94
Query: 240 gggtgggaaggaggtatgggatgtg 264
| |||||||||| ||||||||||||
Sbjct: 93 gagtgggaaggaagtatgggatgtg 69
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 264
Length of database: 665
Length adjustment: 9
Effective length of query: 255
Effective length of database: 656
Effective search space: 167280
Effective search space used: 167280
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
