Query= MSMg01no276_g22.b1 MSMg01no276_g22.b1 CHROMAT_FILE:
MSMg01no276_g22.b1 PHD_FILE: MSMg01no276_g22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:22 2005
(596 letters)
>mm_chr15_15577988_15578980
Length = 993
Score = 990 bits (512), Expect = 0.0
Identities = 575/598 (96%), Gaps = 7/598 (1%)
Strand = Plus / Plus
Query: 1 ctttacactgcactgtcatttgccaatatttcttttggccaatgtcttgctttcttggtt 60
||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||| |||
Sbjct: 201 ctttatactgcactgtcatttgccaatgtttcttttggccaatgtcttgcttacttagtt 260
Query: 61 cttagagatagtgtttcatacagcacagttacattttcaatgtatccccttttagcattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttagagatagtgtttcatacagcacagttacattttcaatgtatccccttttagcattg 320
Query: 121 gactcttaaatacctcatctctgcctctcaccttacaattataggtatgtaccgtcatgc 180
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 321 gactcttaaatacctcatctctgcctctcacgttacaattataggtatgtactgtcatgc 380
Query: 181 ctgtttctatatctgttgtccatctacaattgtggcctatagcttcttcatacatttgtg 240
|||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 381 ctgtttctatatctgttgtccatctacagttgtggcctatagtttcttcatacatttgtg 440
Query: 241 tgaagccactttatgtaaagttagactataccttgtataatataacaccaaaatcaatct 300
|||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 441 tgaagccagtttatgtaaagttagactataccttgtgtaatataacaccacaatcaatct 500
Query: 301 tagttctattgatatcgcgatttgtagatgcatttcacat--aaatgtaaaatttatgtg 358
|||||||||||||||||||||||||||||||||||| | | | ||||||||||||||
Sbjct: 501 tagttctattgatatcgcgatttgtagatgcatttc-cttcga---gtaaaatttatgtg 556
Query: 359 gctcaaaattccagagacattcatgaatgcatctgctactcatatactaataaaacagat 418
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 557 gttcaaaattccagagacattcatgaatgcatctgctactcatgtactaataaaacagat 616
Query: 419 gattttcagataataagaaagcaaaaaaatatctagtataaactgtcaactctccataat 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gattttcagataataagaaagcaaaaaaatatctagtataaactgtcaactctccataat 676
Query: 479 ctaagagaaacatgactgtggtgagcatggagaacaatggggagattaacattttcagtt 538
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 677 ctaagagaaacatgactgtggtgagcacggagaacaatggggagattaacattttcagtt 736
Query: 539 ggcttttttctctttctttttttctggttatctttagtttccaaggttcataacagac 596
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ggcttttttctctct-tttttttctggttatctttagtttccaaggttcataacagac 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 993
Length adjustment: 10
Effective length of query: 586
Effective length of database: 983
Effective search space: 576038
Effective search space used: 576038
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_g22.g1 MSMg01no276_g22.g1 CHROMAT_FILE:
MSMg01no276_g22.g1 PHD_FILE: MSMg01no276_g22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:22 2005
(649 letters)
>mm_chr15_15729498_15730546
Length = 1049
Score = 1100 bits (569), Expect = 0.0
Identities = 631/653 (96%), Gaps = 7/653 (1%)
Strand = Plus / Minus
Query: 1 tttgtttagttctgagctccattttttaatggggttatttgatttcctggagtcaacctt 60
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 995 tttgtttagttctgagctccattttttaatggggttatttgattttctggagtccacctt 936
Query: 61 cttgagttctttatatatattggataacagtaccctatctggtttaggataggaaaagat 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 935 cttgagttctttatatatattggataacagtagcctatctggtttaggataggaaaagat 876
Query: 121 actttcccaatctgttggtggcctttttgtcttattgacggtgtcttttgccttgcagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 actttcccaatctgttggtggcctttttgtcttattgacggtgtcttttgccttgcagaa 816
Query: 181 gctgtgcaattttatgaggtcccatttgtcgattctcaatcttacagcacacgccattgc 240
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 815 gctttgcaattttatgaggtcccatttgttgattctcaatcttacagcacacgccattgc 756
Query: 241 tgttctattcaggaaatttccccctgtacctatatcttcggggcttttccctactttctc 300
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 755 tgttctattcaggaaatttccccctgtacccatatcttcgaggcttttccctactttctc 696
Query: 301 ctctataagtatcgaaattacaaagtatctttataaaacttacttgcaaaaaatttattt 360
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 ttctataagtatcgaacttacaaagtatctttataaaacttacttgcaaaaaatttattt 636
Query: 361 tcaatagaacttgcactataataagtattctatagtaaaagcctgcacaaaataagtgaa 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tcaatataacttgcactataataagtattctatagtaaaagcctgcacaaaataagtgaa 576
Query: 421 cttcaatgtatttatctaagtctggtcagagagttgagtaataattgaaaatccaatcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 575 attcaatgtatttatctaagtctggtcagagagttgagtaataattgaaaatccaatctt 516
Query: 481 gttttt--tttttggttttttgttt-gtttgtttgtttagcgttt-ttatacatccttct 536
||||| ||||| |||||||||| ||||||||||||||| ||| ||||||||||||||
Sbjct: 515 ttttttgtttttt--ttttttgttttgtttgtttgtttagc-tttcttatacatccttct 459
Query: 537 ggattccagtaggatatatataattatataattatctcatattcaaaatgatcatttaag 596
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 458 gggttccagtaggatatatataattatataattatttcatattcaaaatgatcatttaag 399
Query: 597 aaaatctttattgggtattatcaaattatgttgataaaatccttgactgttaa 649
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aaaatctttattgggtattatcaaattatgttgataaaatccttgactgttaa 346
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
